Query= MSMg01no063_d15.b1 MSMg01no063_d15.b1 CHROMAT_FILE:
MSMg01no063_d15.b1 PHD_FILE: MSMg01no063_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:30 2005
(314 letters)
>mm_chr2_19585757_19586471
Length = 715
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 7 ggaattcc-tctaaagcaattaatttgtttgccttacatttttctatacaaactgaccat 65
|||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 515 ggaattccatctaaagcaattaatttgtttgccttacacttttctatacaaaccgaccat 456
Query: 66 ttatttagaaatttcaattgtgagaacttggattatattttacgaagagtgatctgataa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttatttagaaatttcaattgtgagaacttggattatattttacgaagagtgatctgataa 396
Query: 126 cagtgaattctctctctgatctctgatctttcccttggagaacaattgacattgacccag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cagtgaattctctctctgatctctgatctttcccttggagaacaattgacattgacccag 336
Query: 186 tttacagcagaggaaatacactgacagttttgatctgattcatgctacttaccctggtcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttacagcagaggaaatacactgacagttttgatctgattcatgctacttaccctggtcc 276
Query: 246 cattgatcaactggcacaagcatgcggtcagtgctactgaatacgccatcctaaaagaat 305
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 275 cattgatcaactggcacaagcatgcggtcagtgctactgaatacgccatcctgaaagaat 216
Query: 306 gcttgaaat 314
|||||||||
Sbjct: 215 gcttgaaat 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_d15.g1 MSMg01no063_d15.g1 CHROMAT_FILE:
MSMg01no063_d15.g1 PHD_FILE: MSMg01no063_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:30 2005
(285 letters)
>mm_chr2_19451607_19452297
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 285/291 (97%), Gaps = 6/291 (2%)
Strand = Plus / Plus
Query: 1 tatggcatcgggttccagctccctaccgaccatagagaaaagacaaggagtctttgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatggcatcgggttccagctccctaccgaccatagagaaaagacaaggagtctttgtaag 260
Query: 61 agtgtcctattaaaggtgggacaactcaggggcatgggtggcctttcactgtagaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgtcctattaaaggtgggacaactcaggggcatgggtggcctttcactgtagaaaata 320
Query: 121 cccaccttgaactctttacccaccccacacttccagtacctgcatggaaactggctgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaccttgaactctttacccaccccacacttccagtacctgcatggaaactggctgtaa 380
Query: 181 gaataaaaatggcaaggaaagaaaaa------acaaaaacaaatgccttctgagtcactt 234
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 gaataaaaatggcaaggaaagaaaaatcaaaaacaaaaacaaatgccttctgagtcactt 440
Query: 235 tctcctgacgctcacacacctgtgtcgtctaaaacacactccagccgagga 285
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcctgacgctcacacacctgtgtcgtctaaaacacactccagccgagga 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 691
Length adjustment: 9
Effective length of query: 276
Effective length of database: 682
Effective search space: 188232
Effective search space used: 188232
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
