Query= MSMg01no063_k01.b1 MSMg01no063_k01.b1 CHROMAT_FILE:
MSMg01no063_k01.b1 PHD_FILE: MSMg01no063_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:03 2005
(166 letters)
>mm_chr2_68768755_68769320
Length = 566
Score = 267 bits (138), Expect = 3e-76
Identities = 156/162 (96%)
Strand = Plus / Minus
Query: 5 gaattcaccccttatcgatatagcctggctagcatcatagagattattcagattttaaag 64
||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 338 gaattcaccccaaatggatatagcctggctagcatcgtagagattattcagattttaaag 279
Query: 65 ctaatgacaacaacattttgtaagcaacctggaggtacaagcttagacaaacaggaggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctaatgacaacaacattttgtaagcaacctggaggtacaagcttagacaaacaggaggtg 219
Query: 125 ggaggagtcagtaaatgtgtgtgtgtgtgtgtgtgtgtgtgt 166
||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 218 ggaagagtcagtaagtgtgtgtgtgtgtgtgtgtgtgtgtgt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_k01.g1 MSMg01no063_k01.g1 CHROMAT_FILE:
MSMg01no063_k01.g1 PHD_FILE: MSMg01no063_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:04 2005
(282 letters)
>mm_chr2_68619250_68619932
Length = 683
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 ttcagggtcaccctggagaa-gtcatcaaaaagaggagcaacatgactgtggcttccggg 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagggtcaccctggagaatgtcatcaaaaagaggagcaacatgactgtggcttccggg 260
Query: 60 agtgccatcattctgacttgaccagtcaggtttgcaaagaggctgactccccctgtgtgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgccatcattctgacttgaccagtcaggtttgcaaagaggctgactccccctgtgtgt 320
Query: 120 agccagggaggtagaaaattcaaaggactgagaagagaattaagctcggcaaacagcgct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccagggaggtagaaaattcaaaggactgagaagagaattaagctcggcaaacagcgct 380
Query: 180 gtgtaaaatgtatgtctctaggcgctcttctaatccacataaatttgcttatctacggac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaaaatgtatgtctctaggcgctcttctaatccacataaatttgcttatctacggac 440
Query: 240 cgggagggccttgaacatgaattctttgaatgtttgtatgtgc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggagggccttgaacatgaattctttgaatgtttgtatgtgc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
