MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-063K20
Chromosome	2 (Build37)
Map Location	158,604,027 - 158,604,261
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b
Downstream gene	2310007D09Rik, Dhx35, LOC100043891, LOC100043689
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ctnnbl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66642 MGI:1913892
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043681 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 201 ESTs, 3 Proteins

name	Gm691 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277432 MGI:2685537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610036D13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75425 MGI:1922675
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610304G08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70470 MGI:1917720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21817 MGI:98731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630003M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228846 MGI:3606579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bpi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329547 MGI:3045315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16803 MGI:1098776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9430008C03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68108 MGI:1915358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs

name	A930034L06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319317 MGI:2441845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230339M05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228850 MGI:2444531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628935 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628935
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 310 ESTs, 4 Proteins

name	BC054059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246747 MGI:2675492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	Slc32a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22348 MGI:1194488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109275 MGI:1924748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r16b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228852 MGI:2151841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310007D09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71878 MGI:1919128
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71715 MGI:1918965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043891 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 75 ESTs

name	LOC100043689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ctnnbl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802102 GeneID:66642 MGI:1913892
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin, beta like 1 transcript_id : NM_025680.3

name	LOC100043681 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250088 GeneID:100043681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 201 ESTs, 3 Proteins product : similar to Chain A, Crystal Structure Of Human Rangap1-Ubc9 transcript_id : XM_001480700.1

name	Gm691 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348495 GeneID:277432 MGI:2685537
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 691, (NCBI) transcript_id : NM_198627.1

name	2610036D13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859731 GeneID:75425 MGI:1922675
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610036D13 gene transcript_id : NM_029282.1

name	2610304G08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892156 GeneID:70470 MGI:1917720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610304G08 gene transcript_id : NM_027434.2

name	Tgm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130416 GeneID:21817 MGI:98731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transglutaminase 2, C polypeptide transcript_id : NM_009373.3

name	D630003M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387782 GeneID:228846 MGI:3606579
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630003M21 gene transcript_id : NM_177657.3

name	Bpi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386031 GeneID:329547 MGI:3045315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bactericidal permeablility increasing protein transcript_id : NM_177850.3

name	Lbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865990 GeneID:16803 MGI:1098776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipopolysaccharide binding protein transcript_id : NM_008489.2

name	9430008C03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250233 GeneID:68108 MGI:1915358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs product : RIKEN cDNA 9430008C03 gene, transcript variant 1 transcript_id : XM_001481174.1

name	9430008C03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250231 GeneID:68108 MGI:1915358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 9430008C03 gene, transcript variant 2 transcript_id : XM_001481175.1

name	A930034L06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286808 GeneID:319317 MGI:2441845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930034L06 gene transcript_id : NM_175692.3

name	B230339M05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487298 GeneID:228850 MGI:2444531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230339M05 gene transcript_id : NM_177658.3

name	LOC628935 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250235 GeneID:628935
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 310 ESTs, 4 Proteins product : similar to coiled-coil domain containing 72 transcript_id : XM_902784.3

name	BC054059 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750561 GeneID:246747 MGI:2675492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC054059 transcript_id : NM_145635.2

name	LOC545481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367391 GeneID:545481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : similar to likely orthologue of H. sapiens chromosome 20 open reading frame 95 (C20orf95) transcript_id : XM_619836.3

name	Slc32a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490379 GeneID:22348 MGI:1194488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 32 (GABA vesicular transporter), member 1 transcript_id : NM_009508.2

name	Actr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91176334 GeneID:109275 MGI:1924748
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP5 actin-related protein 5 homolog (yeast) transcript_id : NM_175419.4

name	Ppp1r16b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372346 GeneID:228852 MGI:2151841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 16B transcript_id : NM_153089.3

name	2310007D09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625882 GeneID:71878 MGI:1919128
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310007D09 gene transcript_id : NM_027975.1

name	Dhx35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21919419 GeneID:71715 MGI:1918965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 35 transcript_id : NM_145742.1

name	LOC100043891 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250236 GeneID:100043891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 75 ESTs product : hypothetical protein LOC100043891 transcript_id : XM_001481178.1

name	Ctnnbl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981221 CCDS:CCDS16982.1 GeneID:66642 MGI:1913892
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : nuclear protein NAP protein_id : NP_079956.2

name	LOC100043681 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250089 GeneID:100043681
definition	codon_start : 1 product : similar to Chain A, Crystal Structure Of Human Rangap1-Ubc9 protein_id : XP_001480750.1

name	Gm691 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348496 GeneID:277432 MGI:2685537
definition	codon_start : 1 product : hypothetical protein LOC277432 protein_id : NP_941029.1

name	2610036D13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859732 CCDS:CCDS16983.1 GeneID:75425 MGI:1922675
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : novel protein containing HEAT repeat domains product : hypothetical protein LOC75425 protein_id : NP_083558.1

name	2610304G08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328077 CCDS:CCDS16984.1 GeneID:70470 MGI:1917720
definition	codon_start : 1 product : cell-cycle related and expression-elevated protein in tumor protein_id : NP_081710.1

name	Tgm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678329 CCDS:CCDS16985.1 GeneID:21817 MGI:98731
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence TAS]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence TAS]; GO:0016020 - membrane [Evidence TAS] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA] [Evidence NAS]; GO:0005525 - GTP binding [Evidence NAS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003810 - protein-glutamine gamma-glutamyltransferase activity [Evidence IDA] [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007200 - G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence ISS]; GO:0018149 - peptide cross-linking [Evidence IEA] [Evidence TAS]; GO:0045785 - positive regulation of cell adhesion [Evidence IMP] codon_start : 1 note : C polypeptide; tissue transglutaminase; protein-glutamine-gamma-glutamyltransferase; TG C; protein-glutamine gamma-glutamyltransferase product : transglutaminase 2, C polypeptide protein_id : NP_033399.1

name	D630003M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244074 CCDS:CCDS16986.1 GeneID:228846 MGI:3606579
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC228846 protein_id : NP_808325.1

name	Bpi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244434 CCDS:CCDS16987.1 GeneID:329547 MGI:3045315
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0008289 - lipid binding [Evidence IEA] codon_start : 1 product : bactericidal/permeability-increasing protein protein_id : NP_808518.1

name	Lbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865991 CCDS:CCDS16988.1 GeneID:16803 MGI:1098776
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0001530 - lipopolysaccharide binding [Evidence IDA] GO_process : GO:0042742 - defense response to bacterium [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0051707 - response to other organism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : lipopolysaccharide-binding protein protein_id : NP_032515.2

name	9430008C03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250232 GeneID:68108 MGI:1915358
definition	codon_start : 1 product : hypothetical protein LOC68108 isoform 2 protein_id : XP_001481225.1

name	9430008C03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250234 GeneID:68108 MGI:1915358
definition	codon_start : 1 product : hypothetical protein LOC68108 isoform 1 protein_id : XP_001481224.1

name	A930034L06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286809 GeneID:319317 MGI:2441845
definition	codon_start : 1 product : hypothetical protein LOC319317 protein_id : NP_783623.2

name	B230339M05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487299 GeneID:228850 MGI:2444531
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC228850 protein_id : NP_808326.2

name	LOC628935 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82887191 GeneID:628935
definition	codon_start : 1 product : hypothetical protein protein_id : XP_907877.1

name	BC054059 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704114 CCDS:CCDS16990.1 GeneID:246747 MGI:2675492
definition	codon_start : 1 note : apidogenin; likely orthologue of H. sapiens small adipocyte factor 1 (SMAF1) product : small adipocyte factor 1 protein_id : NP_663610.1

name	LOC545481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367392 GeneID:545481
definition	codon_start : 1 product : similar to likely orthologue of H. sapiens chromosome 20 open reading frame 95 (C20orf95) protein_id : XP_619836.3

name	Slc32a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490380 GeneID:22348 MGI:1194488
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IC]; GO:0045202 - synapse [Evidence ISS] GO_function : GO:0015495 - gamma-aminobutyric acid:hydrogen symporter activity [Evidence IDA]; GO:0015187 - glycine transporter activity [Evidence IDA] GO_process : GO:0015816 - glycine transport [Evidence IDA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vesicular inhibitory amino acid transporter; vasicular inhibitory amino acid transporter 10D product : solute carrier family 32 (GABA vesicular transporter), member 1 protein_id : NP_033534.2

name	Actr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91176335 GeneID:109275 MGI:1924748
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : ARP5 actin-related protein 5 homolog protein_id : NP_780628.3

name	Ppp1r16b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346511 CCDS:CCDS16991.1 GeneID:228852 MGI:2151841
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0019903 - protein phosphatase binding [Evidence ISS] GO_process : GO:0007165 - signal transduction [Evidence ISS] codon_start : 1 note : whn-dependent transcript 4 product : protein phosphatase 1, regulatory (inhibitor) subunit 16B protein_id : NP_694729.1

name	2310007D09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625883 GeneID:71878 MGI:1919128
definition	codon_start : 1 product : hypothetical protein LOC71878 protein_id : NP_082251.1

name	Dhx35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21919420 CCDS:CCDS16993.1 GeneID:71715 MGI:1918965
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : DEAH (Asp-Glu-Ala-His) box polypeptide 35 protein_id : NP_665685.1

name	LOC100043891 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250237 GeneID:100043891
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481228.1

name	LOC100043689 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043689
definition	number : 3 pseudo : _no_value

clone name	MSMg01-342C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-192E14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-063K20.T7 (MSMg01no063_k20.b1)	MSMg01-063K20.TJ (MSMg01no063_k20.g1)
ACC	AG289354	AG289355
length	777	924
length of high quality (start - end)	258 (130 - 387)	---
definition	CHROMAT_FILE: MSMg01no063_k20.b1 PHD_FILE: MSMg01no063_k20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:08:08 2005	CHROMAT_FILE: MSMg01no063_k20.g1 PHD_FILE: MSMg01no063_k20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:08:08 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNCCCCNNCCCCCCNN NNNNNNNNNNNNNNNCCCCCCCCCCCNCCCCTATCATXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCCCTTGCCG GACTCTGCTGCAGTACAAGGATAGGCATCGAGACTGAGAATTCTTCCCTT GGAGGCCTCTGCTGCAGTAGAAGGATAGGCATCGAGACTGACAAGCAGCT GGAATTCTCAGCAGAGTGGTTGGTTAATGTGATTCAGATACAAGGGATTT TTTTACTGTTGAGTTTGGGAGATGGAGAAGCCCTGACCACTCCCAATTGC AAAACAGCTCCCAAATGCTGGCTTCCTGACTCGATCTGCAGGGACTTGTT CGCCCTGCCTCCCTGCCTGGAATTTCTGAGGCGCCTTGAATTATGTTGTA TGCACGCCCCCCACCCCAGGGTATTAGATTTCTATATCGACGGAAGGACC CTGGCAGCTGGCAGTATCTCCCTTGTGCGGACCTGTTCTGCGTAGCTGCT ACCCCACTCATATGAATCTGCCGCCGATGCAGACTCCACCGAACTCCTGG AACTTGCTAGCCTGCTAGCTGCCTACCTTTTTTTGCCCCTCCCGTATCGG CCTCTTACTCCTTCTAACTCTCGAAACCCCAATCATTTTACCAGGCCCTC ATTGTCTCCACCCCCGTCTTTTATCTCCGCGCCCTCCCCGTCCTTAACCC CACCCGTCTGGTACCAGTACGCCTTTG	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCTTG TACCCATGATAGTGGGTAGAGCCTGGGCGGCCGCCTGTTCCCGCTATCGT CAAAACCAAAACCTGTCTTTCTTATAAAAATTCCGCACATTTCTTTGGGG GTAAAAAACTCCCTAAACCACCATCTCTCTTATAAAAGCTTAGTTCGACA CCCTCGCGCACATACACATACTCCTTTTTTTCCCTCCTCATATACATCCC CTCACCTCCCACACTCCCTAACTCCAACGGGAAATTTCCTATCTTGTTGG CCTTTTCTTCCAAAGCTACAAAACAAACCCTTAAATCAACCGGGTCAAAT TTCTATCCGGGGTAAACACAGGACGGACCCCCTACTTTCAAACCTCCGCC AAAGGGCAAAAAAAAAAAAAAAAAGGGTCAAACAATAAGCAATTTTCCAA AGGCTTTTCCTGGAAACACGAGAAATTTTTTCTCCCGGGGGAAAGGGTAA AAGGGGGGTAACCTCTTCCCCGACAAAAACCCTATTTTTTTGGGGGTACC AAAATAAAACCCCCTCTGCGTGTGCCCCCTCCCCTCTTTTGGTGTCGTGC TCCGAAAACATATTCAATAGTAAAAAACAACCCTCTATTCATCGTGGGGT GTTATCGCCCTCATTCTTCCTCTACCGCCTTCATATACTCAATACCAAAA AAATAAGGTCAGGCCCCCACATAATAATAAAACTATTATCTTACTTCGGA GTCTTCAGCTATTAGAAATATTACCGTCTCTTCACTCTTTTATAATTATT ACCTTCTTATAAGTCTACATCTCTTACACCACCACTTTCCTCTTTGCACC ATCGTCACTGGGATGGTTTGCATG
quality values	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 3 7 7 3 0 0 3 7 7 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 9 9 7 7 8 9 8 3 0 3 7 6 8 13 8 7 8 8 8 9 15 19 30 37 37 37 37 37 37 39 39 33 36 33 33 33 33 36 37 33 33 33 30 27 21 25 10 10 9 9 8 8 10 13 22 30 28 28 28 28 28 36 37 37 30 22 22 24 24 28 28 48 41 41 46 37 37 25 25 14 12 11 11 11 11 18 22 34 35 43 37 39 32 32 23 23 14 14 14 24 13 16 15 15 15 16 32 31 23 23 28 31 36 33 33 31 24 24 28 19 28 36 31 41 41 43 48 57 43 43 37 37 25 18 18 15 13 17 20 32 32 47 47 44 36 37 28 37 28 28 18 15 13 26 20 36 36 30 28 24 35 35 39 43 47 47 47 47 41 50 36 36 17 17 17 32 32 33 32 32 35 43 43 41 41 41 41 52 52 42 42 35 32 27 27 21 21 20 32 20 23 23 24 43 35 35 43 32 32 28 23 23 28 43 43 43 28 23 23 25 43 43 33 32 32 19 19 23 28 43 43 52 57 57 52 52 52 43 43 24 28 22 32 24 32 32 32 32 27 15 14 14 21 27 32 32 18 17 17 18 19 15 16 16 32 31 37 32 32 25 25 36 36 40 37 28 28 24 28 32 26 19 13 11 11 18 24 32 35 37 37 32 19 15 15 16 24 32 28 35 32 39 32 39 42 33 32 35 39 39 43 33 33 25 25 20 31 20 20 15 24 19 21 15 15 10 10 10 16 16 24 18 20 15 15 14 21 21 23 19 22 22 19 19 22 28 28 28 30 30 18 14 14 18 22 22 18 28 24 24 10 10 8 8 8 12 12 19 26 12 8 6 6 8 8 8 8 8 10 10 8 10 12 10 9 9 10 11 12 12 13 15 10 8 8 8 10 9 9 10 11 10 10 11 11 11 11 12 11 12 10 10 11 11 17 10 9 11 12 8 8 6 6 8 8 10 15 8 8 8 8 8 8 12 11 11 12 12 12 11 10 10 10 10 10 12 14 15 13 27 12 19 16 23 13 13 10 13 12 12 8 8 8 8 8 8 11 13 13 10 8 6 6 6 8 8 8 10 11 10 8 8 8 8 8 11 8 11 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 11 11 8 8 8 8 8 8 8 8 10 10 10 10 11 11 15 12 10 10 10 10 18 15 21 15 8 8 10 8 8 8 10 10 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 13 13 13 11 12 10 15 15 12 13 11 10 10 13 10 8 7 7 6 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 10 10 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 6 6 6 6 10 9 9 7 8 8 8 8 8 10 10 8 9 10 15 19 12 10 10 9 8 8 8 8 8 8 10 10 9 9 10 10 12 12 9 9 9 10 9 8 6 6 6 7 10 8 8 8 8 8 8 7 6 8 8 9 10 9 9 9 9 10 10 10 8 8 8 8 12 12 12 9 9 10 8 10 8 10 10 10 10 8 6 6 6 8 8 9 9 9	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 6 6 6 8 6 9 7 7 13 10 8 8 8 8 8 10 10 13 10 8 8 8 8 8 8 10 10 10 10 10 20 19 17 18 15 15 9 9 10 10 10 10 10 10 6 8 6 6 8 8 8 8 8 10 8 10 15 24 25 16 13 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 9 13 9 10 8 8 9 9 8 8 10 8 8 8 9 9 9 12 10 10 10 11 12 12 10 10 10 10 10 10 10 10 8 8 8 8 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 10 12 10 10 8 8 8 8 8 12 10 9 9 9 10 11 10 10 8 8 8 8 8 8 10 8 10 10 10 6 6 6 6 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 11 12 9 9 10 10 14 23 19 13 8 8 8 8 10 9 9 10 8 8 6 6 8 6 8 9 10 10 9 8 8 8 8 8 8 6 6 6 6 10 10 11 11 8 8 6 6 8 8 8 8 6 10 8 10 10 8 9 8 10 10 10 10 8 8 8 8 8 7 8 7 8 10 12 11 11 11 11 10 11 8 8 8 8 8 6 6 6 6 8 8 8 10 9 8 8 8 6 6 6 10 12 16 16 16 10 12 10 13 9 9 12 12 10 10 10 12 9 6 6 6 6 12 10 12 12 19 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 10 10 11 15 12 10 10 8 8 8 8 8 8 8 8 10 10 9 9 9 8 8 8 8 8 10 10 12 11 11 11 10 10 12 10 12 12 20 28 32 28 24 23 23 15 13 12 13 9 11 11 11 11 11 8 8 6 9 8 8 8 8 8 9 10 15 14 15 22 12 11 9 10 9 9 8 8 10 8 10 8 9 9 9 10 10 11 8 6 8 8 8 8 10 10 10 10 14 14 16 15 10 10 9 11 10 12 11 13 11 11 11 9 9 10 9 9 9 12 9 8 8 8 8 8 10 10 10 17 12 10 10 8 8 8 9 9 8 10 9 10 10 10 10 9 6 8 6 6 6 8 8 10 10 19 13 14 14 14 24 24 28 16 16 10 10 10 10 8 8 8 8 8 8 11 10 10 9 9 13 15 16 13 10 10 12 11 8 8 8 8 6 6 8 6 6 6 6 10 10 12 8 8 9 10 12 13 10 10 10 10 10 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 10 12 8 8 8 8 8 12 8 12 8 8 8 8 8 8 10 10 16 10 13 15 13 8 13 11 10 10 13 10 8 8 8 8 8 8 8 8 8 8 8 10 9 10 9 7 8 8 8 8 8 8 8 18 10 10 10 7 6 8 8 11 10 10 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 11 11 11 11 10 8 8 8 8 10 10 10 10 9 8 8 8 8 8 12 13 13 18 12 13 8 6 8 8 8 8 8 8 10 10 10 10 10 11 10 10 10 8 8 8 8 8 9 10 10 10 11 10 11 6 6 6 6 8 6 10 10 8 8 6 6 6 6 6 6 8 8 6 6 10 7 7 10 8 6 6 6 8 8 10 13 10 10 10 8 8 8 8 8 8 8 8 12 8 9 8 12 12 8 8 8 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 14 10 15 12 10 8 8 8 8 8 8 8 8 8 8 10 10 11 11 11 11 11 13 12 12 12 12 8 12 6 7 7 7 8 6 7 8 8 8 8 12 8 8 8 8 8 9 11 12 11 11 8 8 6 6 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no063_k20.b1 MSMg01no063_k20.b1 CHROMAT_FILE:
MSMg01no063_k20.b1 PHD_FILE: MSMg01no063_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:08 2005
         (258 letters)



>mm_chr2_158603804_158604461
          Length = 658

 Score =  402 bits (208), Expect = e-117
 Identities = 229/236 (97%), Gaps = 2/236 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  ctctgctgcagtacaaggataggcatcgagactgagaattcttcccttggaggcctctgc 83
           ||||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||
Sbjct: 224 ctctgctgcagtagaaggag-ggcatcgagactgagaattcttcccttggagggctctgc 282

                                                                       
Query: 84  tgcagtagaaggataggcatcgagactgacaagcagctggaattctcagcagagtggttg 143
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 283 tgcagtagaaggataggcatcaagactgagaagcagctggaattctcagcagagtggttg 342

                                                                       
Query: 144 gttaatgtgattcagatacaagggattttttt-actgttgagtttgggagatggagaagc 202
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 343 gttaatgtgattcagatacaagggattttttttactgttgagtttgggagatggagaagc 402

                                                                   
Query: 203 cctgaccactcccaattgcaaaacagctcccaaatgctggcttcctgactcgatct 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cctgaccactcccaattgcaaaacagctcccaaatgctggcttcctgactcgatct 458


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space:   161601
Effective search space used:   161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information