CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGCT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTCCTCAGA
AAACTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGAAGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTACAATAGCCAGAAGCTGGAAGGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGG
AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTA
AGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAA
AAATGAAGACTGAAGTGTGAACACTATGCCCCTCCTTAGAAGTGGGAGCA
AN

NAAATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGGTTGTCTTTGTCATT
TTATTCACCCATATACTGTGTTTTCTTGAACTAAGATATTAATTAATTAA
ACCTTATTGTGTAGGTTATGTGGTGGTCTCGCATAGAACAAAAATGGAAG
ATGTACTGTAAAGAATGGTTCCATTTGGATGGATGGGTAGGAGAAACATT
TTGTATGAAAGAAAAATATTTGAGTTGTTCATTTATGGAGAAGGGGGGAG
AGGGAGTAATCAGGAAAGCCATATGAATGAGAGTGCCAAGTAAGCTTGTT
CATGAACCAATAAAAGCAGTTATAGGTTTGTCATTTGAAAATTTTAGACA
TTTTTTTATATTTAAGAACTTGTATTTGACTCTGTAAGTGTAGTTTTTAA
ATTATCTTTTAAAACAGATGTTTATTCACCCTATTTTCTTTTTCTTTTTT
TTTTTTTTTTTAGGATTTGAATTAATCGAGATGAGCAGTCGTAAAACCAA
GAGTAATGCACATGCAGAGTGTCTTTCACAGGTTAGTATATATGTTCCTT
AATCTAAAAGCCTGCACCTTAATCTCAAAATCTTGCTAAAGGTGATCAGA
AAAATGATCATCTTTTTAATCTGATTTTTTTTTCTTAGCACTTTTCTAGT
GGAGATAGCTTTACAAGTTGGAAAAN

Query= MSMg01no064_b24.g1 MSMg01no064_b24.g1 CHROMAT_FILE:
MSMg01no064_b24.g1 PHD_FILE: MSMg01no064_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:48 2005
         (645 letters)



>mm_chr2_48795751_48796794
          Length = 1044

 Score = 1067 bits (552), Expect = 0.0
 Identities = 588/602 (97%), Gaps = 5/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gttgtctttgtcattttattcacccatatactgtgttttcttgaactaagatattaatta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttgtctttgtcattttattcacccatatactgtgttttcttgaactaagatattaatta 542

                                                                       
Query: 65  attaaaccttattgtgtaggttatgtggtggtctcgcatagaacaaaaatggaagatgta 124
           ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 541 attaaaccttattgtgtaggttatgtggtggtctcacatagaaaaaaaatggaagatgta 482

                                                                       
Query: 125 ctgtaaagaatggttccatttggatggatgggtaggagaaacattttgtatgaaagaaaa 184
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtaaagaatggttccagttggatggatgggtaggagaaacattttgtatgaaagaaaa 422

                                                                       
Query: 185 atatttgagttgttcatttatggagaaggggggagagggagtaatcaggaaagccatatg 244
           |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||
Sbjct: 421 atatttgagttgttcatttatggagaagcggggagggggagtaatcaggaaagccagatg 362

                                                                       
Query: 245 aatgagagtgccaagtaagcttgttcatgaaccaataaaagcagttataggtttgtcatt 304
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 aatgagagtgccaagtaagcttgttcatgaaccaataaaagcagttgtaggtttgtcatt 302

                                                                       
Query: 305 tgaaaattttagacatttttttatatttaagaacttgtatttgactctgtaagtgtagtt 364
           ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 301 tgaaaattttagaca-tttttaatatttaagaacttgtatttgactctgtaaatgtagtt 243

                                                                       
Query: 365 tttaaattatcttttaaaacagatgtttattcaccctattttctttttctt----ttttt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 242 tttaaattatcttttaaaacagatgtttattcaccctattttctttttctttttcttttt 183

                                                                       
Query: 421 ttttttttttaggatttgaattaatcgagatgagcagtcgtaaaaccaagagtaatgcac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttttttttttaggatttgaattaatcgagatgagcagtcgtaaaaccaagagtaatgcac 123

                                                                       
Query: 481 atgcagagtgtctttcacaggttagtatatatgttccttaatctaaaagcctgcacctta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgcagagtgtctttcacaggttagtatatatgttccttaatctaaaagcctgcacctta 63

                                                                       
Query: 541 atctcaaaatcttgctaaaggtgatcagaaaaatgatcatctttttaatctgattttttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  atctcaaaatcttgctaaaggtgatcagaaaaatgatcatctttttaatctgattttttt 3

             
Query: 601 tt 602
           ||
Sbjct: 2   tt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space:   656590
Effective search space used:   656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)