TTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGTAAGTCTGTTATAAGAATCCCAAGCTGCCATTTGTGAAATGCTA
TAATCTCACAGACACAAACCTGGACATGAGAACTCCATGTCCTGGGATTT
AGACTGGGGCTGAACTTTGATCAGCCAGTGATGCCCTTATTTGTTTGGCG
TTTAGAAATGACACAAAGCTCACACTAACTTCCCAGAACCCTGCATGTGT
CAATGTTGAATGACCTCCTTTGCAGTGAGAACTGGATCCCATGGAACTGC
AAACAAAAGAAACTTGCCCTAACTAAAGAAATACTTCTTCCAGATGGAGA
CAACCCCTCTATGTGGGTGGAAGGCCTGCTGTCTTCCACTGCATGCTGAG
CTCTAGACACTGCCCAGCCTATTGCCTTCCTAAAGGATTCTCACTAAAAA
AAAAACTTTCTACTCTGGTCCACAATGTGAGTTCATTCACAGCATGAGCA
TCATGCCACTGTTAGTGTGGTGACTGAACTATGAGTCCACAGCAATATAT
TAGGTAATTGTCCTTTTTGTCTTGAAGGGACATTGTACAGGTCAGGTTCT
ATGATCTGCTAAGGTCCTGTAGACCCTGAACATAGTGTCTATTCTTTCCT
GATTTTACCCAATTAGCATGCCGATGTGTGAAAA

ATGAAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTGTTTAGAAATGTACCCCATTTTAATTT
ATTTGGTTGGTTGATGTGCTACCAGTTTGTCCAGTTGGTGGTAATCTTTG
CCTTACAGAAACTTTTAAGGTTAATGAGGTCCCTTTTATGAATTTTTGAT
CTTAGTTCCTGTGGTATAGGCTTTATGCTCCGAACATCATCCCCTGTGCT
TATTCTCTACATTTTTTCTATCAGTTTAGTGTATCTGGTTTTATGTTGAA
GCCTTTGACCTATTTGAACTTGAATTTTATAAAAGGTGATAAATATGGAT
CTACTTGCATTCTTCTACATACAAACATCTATTTGTTGGCAATGCTGTCT
TTTTTCCCAGTATATATTTCTAGCTTCTTTACCAAAAATCGGGTGAGCAT
ATGGGTTGGGTCTTCAATTGAGTTCTGGAGATTATCTTGACTGTTTTCTG
TGCCAATACTTTGCCAATTTATTACTATTGCTTTCTTTTGCAACCTGAAC
TCAAGGATGGTGATACAGACAGCAATATTTTGTTTGTTTGCTTTTTGTTT
GTTTGTTTTTCAGGATTATTTTAGCTATTGTGGGTTCCTCTTCACTTTAT
TACTTATTTATTTATTTAATTCATTCATTT

Query= MSMg01no065_o01.b1 MSMg01no065_o01.b1 CHROMAT_FILE:
MSMg01no065_o01.b1 PHD_FILE: MSMg01no065_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:30 2005
         (527 letters)



>mm_chr2_67719575_67720498
          Length = 924

 Score =  928 bits (480), Expect = 0.0
 Identities = 512/524 (97%), Gaps = 3/524 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttgtaagtctgttataagaatcccaagctgccatttgtgaaatgctataatct 63
           ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 724 ggaattcttgtaagtttgttataggaatcccaagctgccatctgtgaaatgctataatct 665

                                                                       
Query: 64  cacagacacaaacctggacatgagaactccatgtcctgggatttagactggggctgaact 123
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 664 cacagacacaaacctggacatgagaactccatgtcctgggctttagactggggctgaact 605

                                                                       
Query: 124 ttgatcagccagtgatgcccttatttgtttggcgtttagaaatgacacaaagctcacact 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttgatcagccagtgatgcccttatttgtttggcgtttagaaatgacacaaagctcacact 545

                                                                       
Query: 184 aacttcccagaaccctgcatgtgtcaatgttgaatgacctcctttgcagtgagaactgga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aacttcccagaaccctgcatgtgtcaatgttgaatgacctcctttgcagtgagaactgga 485

                                                                       
Query: 244 tcccatggaactgcaaacaaaagaaacttgccctaactaaagaaatacttcttccagatg 303
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 484 tcccatggaactgcaaacaaaagaaactttccctaactaaagaaatacttcttccagatg 425

                                                                       
Query: 304 gagacaacccctctatgtgggtggaaggcctgctgtcttccactgcatgctgagctctag 363
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 gagacaacccctctatgtgggtggaaggcctgctgtcttccactgcaagctgagctctag 365

                                                                       
Query: 364 acactgcccagcctattgccttcctaaaggattctcactaaaaaaaaaactttctactct 423
           |||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||
Sbjct: 364 acactgcccagcctattgccttcctaaaggattctcactagaaaac---ctttctactct 308

                                                                       
Query: 424 ggtccacaatgtgagttcattcacagcatgagcatcatgccactgttagtgtggtgactg 483
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 307 ggtccacaatgtgagttcattcacagcatgagaatcatgccactgttagtgtggtgactg 248

                                                       
Query: 484 aactatgagtccacagcaatatattaggtaattgtcctttttgt 527
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aactatgagtccacagcaatatattaggtaattgtcctttttgt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 924
Length adjustment: 10
Effective length of query: 517
Effective length of database: 914
Effective search space:   472538
Effective search space used:   472538
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)