Query= MSMg01no066_b18.b1 MSMg01no066_b18.b1 CHROMAT_FILE:
MSMg01no066_b18.b1 PHD_FILE: MSMg01no066_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:48 2005
(446 letters)
>mm_chr2_145298437_145299282
Length = 846
Score = 824 bits (426), Expect = 0.0
Identities = 441/446 (98%)
Strand = Plus / Minus
Query: 1 acttaatacaataatatgaaaaggttttagatttaatttgaaaatataaacagattgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acttaatacaataatatgaaaaggttttagatttaatttgaaaatataaacagattgtct 404
Query: 61 taattcatttcagtctttcataaactttaaaccctgcttcattttggttaatcatatata 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 taattaatttcagtctttcataaactttaaaccctgcttcattttggttaatcatatata 344
Query: 121 tgcttctatataaccccttcatgtgtgtgtgttatatagtatgtttacatgataaagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgcttctatataaccccttcatgtgtgtgtgttatatagtatgtttacatgataaagtcc 284
Query: 181 ccccttcaaaggagctagattcaaggtggcttaaaaaataagtatgcatgcaagcccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccccttcaaaggagctagattcaaggtggcttaaaaaataagtatgcatgcaagcccagt 224
Query: 241 tcaagttttttttaattcacaagatttttaaaatctaataaattagttattattttaagt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcaagtcccttttaattcacaagatttttaaaatctaataaattagttattattttaagt 164
Query: 301 ttgtttttaaaaatgtctttaggattattaacacattttgcctatgttgttgctagatat 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 163 ttgtttttaaaaatgtctttaggaatattaacacattttgcctatgttgttgctagatat 104
Query: 361 taaagacacaatctgtttttatatttcaaatatagatgtctgggttttcattaaaacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 taaagacacaatctgtttttatatttcaaatatagatgtctgggttttcattaaaacatc 44
Query: 421 aaattatctgcttttgatagcatgtg 446
||||||||||||||||||||||||||
Sbjct: 43 aaattatctgcttttgatagcatgtg 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_b18.g1 MSMg01no066_b18.g1 CHROMAT_FILE:
MSMg01no066_b18.g1 PHD_FILE: MSMg01no066_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:48 2005
(129 letters)
>mm_chr2_145177956_145178482
Length = 527
Score = 230 bits (119), Expect = 2e-65
Identities = 126/129 (97%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 1 acctaacttttagaacatttgagtgctgcacccaaaggtctcattattttagcagaatgc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctaacttttagaacagttgagtgctgcacccaaaggtctcattattttagcagaatgc 260
Query: 61 ctagtattcttaaatgtttggggtgggagtagggagtggagataaaaaaaaaaagaggga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctagtattcttaaatgtttggggtgggagtagggagtggagataaaaaaaaa--gaggga 318
Query: 121 aagaagaag 129
|||||||||
Sbjct: 319 aagaagaag 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 527
Length adjustment: 8
Effective length of query: 121
Effective length of database: 519
Effective search space: 62799
Effective search space used: 62799
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
