Query= MSMg01no066_b22.b1 MSMg01no066_b22.b1 CHROMAT_FILE:
MSMg01no066_b22.b1 PHD_FILE: MSMg01no066_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:48 2005
(548 letters)
>mm_chr2_146711161_146712108
Length = 948
Score = 1029 bits (532), Expect = 0.0
Identities = 544/552 (98%), Gaps = 8/552 (1%)
Strand = Plus / Minus
Query: 1 aggccagcccaacctacatagtgagacactgtctacacagtgaggtactgtctcaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 aggccagcccaacctacatagtgagacactgtctacacagtgaggtactgtctcaaaaca 750
Query: 61 aattatagggctagagatgtagctcacttgctaagtgagcaaaagtgagtaaaactgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aattatagggctagagatgtagctcacttgctaagtgagcaaaagtgagtaaaactgagg 690
Query: 121 tttaaaacacagcgcaagagacatagatcatttaaaccatcattgaaatgaagactcggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tttaaaacacagcgcaagagacatagatcatttaaaccatcattgaaatgaagactcggg 630
Query: 181 gctcggcagcagacctaacagaattagcaatgctgaaacaggtagactgaaattgtgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gctcggcagcagacctaacagaattagcaatgctgaaacaggtagactgaaattgtgtca 570
Query: 241 tttgagac----aattttgaatgaagaaagctttcagcctcagaacaccatttacaatat 296
|||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttgagacaaaaaa----gaatgaagaaagctttcagcctcagaacaccatttacaatat 514
Query: 297 caaatacattaaagcctagatgaaaagaaaggctatgggggaagaaggcagcaataatct 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 caaatacattaaagcctagatgaaaagaaaggctatgggggaagaaggcagcaataatct 454
Query: 357 ttacaactttggaataagcacatttcaagggtaccagaaacttaaatacaaatgaaaagg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttacaactttggaataagcacatttcaagggtaccagaaacttaaatacaaatgaaaagg 394
Query: 417 tattattctctaaaaaccctaagcatgactcatatatgaatcttataaaaatatctattt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tattattctctaaaaaccctaagcatgactcatatatgaatcttataaaaatatctattt 334
Query: 477 ttcagtcatggtttgaatctgaaacacaattccatactaatgatactaacataagatgat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttcagtcatggtttgaatctgaaacacaattccatactaatgatactaacataagatgat 274
Query: 537 agttaccaaatc 548
||||||||||||
Sbjct: 273 agttaccaaatc 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_b22.g1 MSMg01no066_b22.g1 CHROMAT_FILE:
MSMg01no066_b22.g1 PHD_FILE: MSMg01no066_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:49 2005
(476 letters)
>mm_chr2_146551399_146552274
Length = 876
Score = 897 bits (464), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Plus
Query: 1 gatctcactgagatccactagcctctgcttcttcaatgctgggattaaaggtgtgtgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatctcactgagatccactagcctctgcttcttcaatgctgggattaaaggtgtgtgtga 260
Query: 61 cacaattggagcctttcttccctacctgatattgttctgcaaacctgctggtggattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaattggagcctttcttccctacctgatattgttctgcaaacctgctggtggattttc 320
Query: 121 cccccctcccccaggccctcactggatgcctcctattcttaagcccattttgcagagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccccctcccccaggccctcactggatgcctcctattcttaagcccattttgcagagtca 380
Query: 181 cccaggcccagagaataacctcaaacctctggtttctaagtgccatctactgagtagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaggcccagagaataacctcaaacctctggtttctaagtgccatctactgagtagaga 440
Query: 241 gagtcccagtccttatctagagagccactggcttctcaaatgctgtgtcttgagcacacc 300
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtcccagtccagacctagagagccactggcttctcaaatgctgtgtcttgagcacacc 500
Query: 301 cccttggtttttggtatgcctaagagtcccattccctaggaccttcttccttttttctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttggtttttggtatgcctaagagtcccattccctaggaccttcttccttttttctat 560
Query: 361 aactgtccctcctcctcaagcccactacaatggcagacatggcgtgcaagcctgtagctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactgtccctcctcctcaagcccactacaatggcagacatggcgtgcaagcctgtagctc 620
Query: 421 catggaccaagtgttttcaataacactatgaggctcagtcttcacagtatctgttc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catggaccaagtgttttcaataacactatgaggctcagtcttcacagtatctgttc 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
