Query= MSMg01no066_i21.b1 MSMg01no066_i21.b1 CHROMAT_FILE:
MSMg01no066_i21.b1 PHD_FILE: MSMg01no066_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:23 2005
(538 letters)
>mm_chr2_137107378_137108316
Length = 939
Score = 969 bits (501), Expect = 0.0
Identities = 519/525 (98%), Gaps = 1/525 (0%)
Strand = Plus / Minus
Query: 15 gaattcacttttttctctcttttgatttttgttttggccaaaaagttatgctggccctgc 74
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 739 gaattcacttttttctctcttttgatttttcttttggccaaaaagttatgctggccctgc 680
Query: 75 taaaagccaaaatgaaccagaatctttctcaagtgtgttatccttctttttctgtgataa 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taaaagccaaaatgaaccagaatctttctcaagtgtgttatccttctttttctgtgataa 620
Query: 135 tttgaatcacttctatgtaagaaaccctaatatttactaaattatctatactcaccaaac 194
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 619 tttgaatcacttctatgtaagaaaccctaatatttactaaattatctacactcaccaaac 560
Query: 195 aattcaatccacatctttgctccgtttgagtggcaagggggacagaatcaacctcacaga 254
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 559 aattcaatccacatctttgctccgtttgagtggcaagggggacagaatcaccctcacgga 500
Query: 255 cttttcaaccatgtagatgtaaaattaaacaagttgtt-ttaatattattccaggaaaac 313
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 499 cttttcaaccatgtagatgtaaaattaaacaagttgttattaatattattccaggaaaac 440
Query: 314 aactcatcacagaatttatgcccaggccagtgttgttccacacaaaggatgaagacaatc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aactcatcacagaatttatgcccaggccagtgttgttccacacaaaggatgaagacaatc 380
Query: 374 ccattgtacctgagacagagtaaacatgcagtttgaaaattatgaattttgccaatgaaa 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccattgtacctgagacagagtaaacatgcagtttgaaaattatgaattttgccaatgaaa 320
Query: 434 tcacatctctgcagttgatccatgtaaagaacatttcctaatgatgttaagtagaaggag 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcacatctctgcagttgatccatgtaaagaacatttcctaatgatgttaagtagaaggag 260
Query: 494 acgagaaggagaaaaggaataatcgagatttacttttttatcaga 538
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acgagagggagaaaaggaataatcgagatttacttttttatcaga 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 939
Length adjustment: 10
Effective length of query: 528
Effective length of database: 929
Effective search space: 490512
Effective search space used: 490512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_i21.g1 MSMg01no066_i21.g1 CHROMAT_FILE:
MSMg01no066_i21.g1 PHD_FILE: MSMg01no066_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:23 2005
(421 letters)
>mm_chr2_137025155_137025973
Length = 819
Score = 743 bits (384), Expect = 0.0
Identities = 412/422 (97%), Gaps = 4/422 (0%)
Strand = Plus / Plus
Query: 1 tttttctcca-catgtatcaaggcctatttaatattgctaacttaagcttggtttcccct 59
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tttttctccatcatgtatcaaggcctattttatattgctaacttaagcttggtttcccct 260
Query: 60 atttcccatatagaacttaataacatcaagccatggaataaataagagaattcaaggaaa 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 261 atttcccatatagaacttaataacatcaagccatagaataaataagagaattccaggaaa 320
Query: 120 ctgtaatttcttcaacagtaatatttttgatgctttatgaaataacaaaaatcacattta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtaatttcttcaacagtaatatttttgatgctttatgaaataacaaaaatcacattta 380
Query: 180 aagaatgaactcttggcctgtactttcctttatactaatttaggcaaataaatgacctac 239
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 381 aagaatgaactcttggcctgtactttcctt-atactaatttaggcaagtaaatgacctac 439
Query: 240 acagtcttttctacaaaggctcctaggttaaattttggtgacattgttaggaaacaccca 299
||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagtcttttc--caaaggtttctaggttaaattttggtgacattgttaggaaacaccca 497
Query: 300 tgaaatcttgtgggtgcatggaaaccacgagtcagtctctaacttactgtgtagatcaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgaaatcttgtgggtgcatggaaaccacgagtcagtctctaacttactgtgtagatcaca 557
Query: 360 ccctattttgtgaacatgttctgttcccaaagtcccttggaaccatggatgcattcttct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccctattttgtgaacatgttctgttcccaaagtcccttggaaccatggatgcattcttct 617
Query: 420 ta 421
||
Sbjct: 618 ta 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 819
Length adjustment: 9
Effective length of query: 412
Effective length of database: 810
Effective search space: 333720
Effective search space used: 333720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
