Query= MSMg01no070_b20.b1 MSMg01no070_b20.b1 CHROMAT_FILE:
MSMg01no070_b20.b1 PHD_FILE: MSMg01no070_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:04 2005
(359 letters)
>mm_chr2_31018666_31019426
Length = 761
Score = 663 bits (343), Expect = 0.0
Identities = 356/361 (98%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 1 ctatggaaagtcaaggtcgcggggacgtgaaacactgtactggagcgaggatgcagctca 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 ctatggaaagtcaaggtcgcggggacatgaaacactgtactggagcgaggatgcagctca 502
Query: 61 gagggagaatggtgcctggaatgtgtaaatgagccgctagattggaatacatcaccgcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 gagggagaatggtgcctggaatgtgtaaatgagccgctagattggaatacatcaccacac 442
Query: 121 ctagatacccaaacaaggtcaatattaagagtgtgccgctctcgcctggctctcctcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagatacccaaacaaggtcaatattaagagtgtgccgctctcgcctggctctcctcaca 382
Query: 181 g--gctctgccaacaatctacagagggccagccccagtttgaagatgcaacactgctgat 238
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcgctctgccaacaatctacagagggccagccccagtttgaagatgcaacactgctgat 322
Query: 239 taatgttctgtcttgtttgtttttgtttttcttgaaatgggatctcatggagaggcccgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 taatgttctgtcttgtttgtttttgtttttcttgaaatgggatctcatggagaggcctgt 262
Query: 299 actgactttcaactcaaaatctttcttgccttgccgatgcaccacaccaagcctggacgt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgactttcaactcaaaatctttcttgccttgccgatgcaccacaccaagcctggacgt 202
Query: 359 a 359
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 761
Length adjustment: 9
Effective length of query: 350
Effective length of database: 752
Effective search space: 263200
Effective search space used: 263200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_b20.g1 MSMg01no070_b20.g1 CHROMAT_FILE:
MSMg01no070_b20.g1 PHD_FILE: MSMg01no070_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:04 2005
(239 letters)
>mm_chr2_30860142_30860780
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 1 tcccgttgtgaactagtaggactggggtgtagagagctcagtgggggagacttgtgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccgttgtgaactagtaggactggggtgtagagagctcagtgggggagacttgtgaggg 260
Query: 61 cccctctcctggacaggcttctcagcccttctcctccgtgttgtttgtaggcctcacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccctctcctggacaggcttctcagcccttctcctccgtgttgtttgtaggcctcacagg 320
Query: 121 catgaagaacctgggaaactcctgttacatgaatgctgccctgcaggccttgtccaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgaagaacctgggaaactcctgttacatgaatgctgccctgcaggccttgtccaattg 380
Query: 181 gtaggttgtcatctgagggaagggcaggaactgtccctggcaaaacctagaaagagcag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggttgtcatctgagggaagggcaggaactgtccctggcaaaacctagaaagagcag 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
