TAAATTTGCGGCGCTAAACGACTCCTATTTTCAGAGAATCCGCGGAATTC
TTATCCTCCACTTCACAGGTGAGAAAACTGAGCAGAACGAATAAATGATG
TATTTACCACCCGCTCACTCTGAAAGCGGAGCTGGGTCTCCAAAGTCTAC
CTCCAACCTGCTTCTTTTCAAAACAGCATCCTGACACGTGATTGATTGCC
AGGCTCCACTAAGAACTGTCATAAAAATAAATCCAATTTCTTCTATGCCC
CTCTGGGTTGGCTCTCAAATAAAAGCTGAATGCCAGAACTCAAACAAACT
GCCATAAACTGAAGTCCAGTTGTTGGAGCTGGGACTCAGGGTCAGAGGTG
CCCAGCCCCGGGCCTATACAGAGCTGTCAACGCTGCTAAACCCAAGATGC
TTCAAGTTCCTGGCATCCTCTAGAAATAAATCAAATTTCAGGGTTTTTTT
TCAATACATGCCAGTACTGTGCTAAGCACTTTGCACAACACAGCTCCTTG
GAACCCTTACAGCAACTGGAAGCGGGGAGGCTTTTCACTCTTCTCACTCT
AGAGATGACAAAATGAGCCTCAGACACACCGAGCAACAGTTAGCGGAACT
GACTAGTTTGCTAACACAGCTTATGCCCCATGCTTCTTTTTCCCCCAGAA
TGTGAGGGCATTTGATACCTAATGATAGTTGAGTGCTC

TGAAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATCCTTATTACGGTCTGTTGCTGATATGGG
CTTGAATCCAGGCATCCTAACTGAGTGGTGTAGATCCCAGGGTACCCTGA
ATGTTAAGAGTAGTTGGCACAGTCTGCCATCCTACCTTGCATCCTTAACT
CATTATGGCAATATACTGAGCCTGACTCTGGGTACACAATGTTCTTAATA
GGGCCCTCTCGTAGGCAGCTGTGCTGTTTTCCATTCTTTAAATAACAGAG
AACCTGCAGTTGGTAAGTCAAAGGGAGTAGTAAGACACCAAACCTATATT
CAGCTTGCACAGAATCTGTGGCCTGAGCCCATGGAACTTTGGGAAAGAGA
CTACAACGCACTGTGCAACGGGAACCTCTTCAGAGGACAGAGATATTACT
TGGGCTCTTTTCCTAATGATACATCTATCCAGGTGTCCTTGTATCTCCCA
TGTCTCTTCTGACTCATTAGTGCATGTGACAAGAGGCATATTGTGCACCT
TGTTGTGAAGTGGGATTCTTGTCACATCCCTGCTTCTAATAACTTCCCAT
TATCTAGACATCAAGAAGTGTAGTTGTTTAGGGATGCACTATATATACTA
TTCACCATGGAACTCTGGTCCAATTGAACTGTCATGCT

Query= MSMg01no070_j16.b1 MSMg01no070_j16.b1 CHROMAT_FILE:
MSMg01no070_j16.b1 PHD_FILE: MSMg01no070_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:44 2005
         (455 letters)



>mm_chr2_161865416_161866270
          Length = 855

 Score =  868 bits (449), Expect = 0.0
 Identities = 452/453 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattcttatcctccacttcacaggtgagaaaactgagcagaacgaataaatgatgtat 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcttatcctccacttcacaggtgagaaaactgagcagaacgaataaatgatgtat 262

                                                                       
Query: 63  ttaccacccgctcactctgaaagcggagctgggtctccaaagtctacctccaacctgctt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttaccacccgctcactctgaaagcggagctgggtctccaaagtctacctccaacctgctt 322

                                                                       
Query: 123 cttttcaaaacagcatcctgacacgtgattgattgccaggctccactaagaactgtcata 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttttcaaaacagcatcctgacacgtgattgattgccaggctccactaagaactgtcata 382

                                                                       
Query: 183 aaaataaatccaatttcttctatgcccctctgggttggctctcaaataaaagctgaatgc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaaataaatccaatttcttctatgcccctctgggttggctctcaaataaaagctgaatgc 442

                                                                       
Query: 243 cagaactcaaacaaactgccataaactgaagtccagttgttggagctgggactcagggtc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagaactcaaacaaactgccataaactgaagtccagttgttggagctgggactcagggtc 502

                                                                       
Query: 303 agaggtgcccagccccgggcctatacagagctgtcaacgctgctaaacccaagatgcttc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agaggtgcccagccccgggcctatacagagctgtcaacgctgctaaacccaagatgcttc 562

                                                                       
Query: 363 aagttcctggcatcctctagaaataaatcaaatttcagggttttttttcaatacatgcca 422
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagttcctgggatcctctagaaataaatcaaatttcagggttttttttcaatacatgcca 622

                                            
Query: 423 gtactgtgctaagcactttgcacaacacagctc 455
           |||||||||||||||||||||||||||||||||
Sbjct: 623 gtactgtgctaagcactttgcacaacacagctc 655


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space:   376025
Effective search space used:   376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no070_j16.g1 MSMg01no070_j16.g1 CHROMAT_FILE:
MSMg01no070_j16.g1 PHD_FILE: MSMg01no070_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:44 2005
         (337 letters)



>mm_chr2_162016580_162017316
          Length = 737

 Score =  636 bits (329), Expect = 0.0
 Identities = 335/337 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catccttattacggtctgttgctgatatgggcttgaatccaggcatcctaactgagtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 catccttattacggtctgttgctgatatgggcttgaatccaggcatcctaactgagtggt 478

                                                                       
Query: 61  gtagatcccagggtaccctgaatgttaagagtagttggcacagtctgccatcctaccttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtagatcccagggtaccctgaatgttaagagtagttggcacagtctgccatcctaccttg 418

                                                                       
Query: 121 catccttaactcattatggcaatatactgagcctgactctgggtacacaatgttcttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 catccttaactcattatggcaatatactgagcctgactctgggtacacaatgttcttaat 358

                                                                       
Query: 181 agggccctctcgtaggcagctgtgctgttttccattctttaaataacagagaacctgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agggccctctcgtaggcagctgtgctgttttccattctttaaataacagagaacctgcag 298

                                                                       
Query: 241 ttggtaagtcaaagggagtagtaagacaccaaacctatattcagcttgcacagaatctgt 300
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctggcaagtcaaagggagtagtaagacaccaaacctatattcagcttgcacagaatctgt 238

                                                
Query: 301 ggcctgagcccatggaactttgggaaagagactacaa 337
           |||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggcctgagcccatggaactttgggaaagagactacaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space:   238784
Effective search space used:   238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)