Query= MSMg01no071_n16.b1 MSMg01no071_n16.b1 CHROMAT_FILE:
MSMg01no071_n16.b1 PHD_FILE: MSMg01no071_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:23 2005
(229 letters)
>mm_chr2_55374678_55375307
Length = 630
Score = 422 bits (218), Expect = e-122
Identities = 227/230 (98%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 1 caatttc-aatattttcttgatagaagacatatttgaatgttgtaatatgccacatttag 59
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatttcaaatgttttcttgatagaagacatatttgaatgttgtaatatgccacatttag 260
Query: 60 ctttgaaagtagattttgatatgaatatgtcaatccttgtgacaagactcaattcggtgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgaaagtagattttgatatgaatatgtcaatccttgtgacaagactcaattcggtgt 320
Query: 120 gaaaattcataatgttaaccaaaaattttcaaataaagtttaacctttaaaattattatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaattcataatgttaaccaaaaattttcaaataaagtttaacctttaaaattattatc 380
Query: 180 tatcatggaagaattatttatgatcacggaagaatgtaatatagtctaga 229
|||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 tatcatggaagaattatttatgatcacggaagaatgcaatatagtctaga 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no071_n16.g1 MSMg01no071_n16.g1 CHROMAT_FILE:
MSMg01no071_n16.g1 PHD_FILE: MSMg01no071_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:23 2005
(249 letters)
>mm_chr2_55535793_55536441
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Minus
Query: 1 ccacttaacacgctaatatttttctgttgtgtttctagttataagctctgtgtctacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ccacttaacacgctaatatttttctgttgtgtttctagttataagctctgtgtctacagg 390
Query: 61 actttaagagctcagagctataatgactggattaaaagcacagccatttggtgcagtgat 120
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 389 acttaaagagctcagagctataatgagtggattaaaagcacagccatttggtgcagtgat 330
Query: 121 gttgtaaagcattgcaggaggcaccatcagtgagaacagcaagatgagctttgttaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gttgtaaagcattgcaggaggcaccatcagtgagaacagcaagatgagctttgttaaggg 270
Query: 181 aactctgccaccccttgcaaataaaattcaagctgttcttaaacatcagtccctatgcag 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aactctgccaccctttgcaaataaaattcaagctgttcttaaacatcagtccctatgcag 210
Query: 241 gttgccttc 249
|||||||||
Sbjct: 209 gttgccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
