Query= MSMg01no073_k21.b1 MSMg01no073_k21.b1 CHROMAT_FILE:
MSMg01no073_k21.b1 PHD_FILE: MSMg01no073_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:49 2005
(320 letters)
>mm_chr2_35623930_35624649
Length = 720
Score = 567 bits (293), Expect = e-166
Identities = 311/317 (98%)
Strand = Plus / Minus
Query: 4 ggaattctttctttctgttctaagcaagctctacaggttacaaactgggcaacagcagag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattctttctttctgttctaagcaagctctacaggttacaaactgggcaacagcagag 461
Query: 64 tgaaagagcagcctttgaacccacctctgctggctgtctccactctctgcattcccatcc 123
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 460 tgaaagagcagcctttgaaggcacctctgctggctgtctgcactctctgcattcccatcc 401
Query: 124 cccatccctccaccattttcccctgccatgggcacctttattatagactgctggtcccca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cccatccctccaccattttcccctgccatgggcacctttattatagactgctggtcccca 341
Query: 184 tctctacccccctgctcagatgtttctgcctgcccggaattcctcccattcccaccattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctctacccccctgctcagatgtttctgcctgcccggaattcctcccattcccaccattt 281
Query: 244 taacagccttgaccagaccctgtgaaacccttcctgcctattatttcctgcagtgcccat 303
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 280 taacagccttgaccagaccctgtgaaacccttcctgcctaagagttcctgcagtgcccat 221
Query: 304 ccctgatatcagcccca 320
|||||||||||||||||
Sbjct: 220 ccctgatatcagcccca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_k21.g1 MSMg01no073_k21.g1 CHROMAT_FILE:
MSMg01no073_k21.g1 PHD_FILE: MSMg01no073_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:49 2005
(490 letters)
>mm_chr2_35492002_35492891
Length = 890
Score = 905 bits (468), Expect = 0.0
Identities = 486/494 (98%), Gaps = 7/494 (1%)
Strand = Plus / Plus
Query: 1 gtgctggcctggccagactcagtcacggtgtagtgggttgccttccctctgccttccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgctggcctggccagactcagtcacggtgtagtgggttgccttccctctgccttccctc 260
Query: 61 ctgaagaccctagagagaagctcactgtaacctgtgtcccagcatggggagtggaagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaagaccctagagagaagctcactgtaacctgtgtcccagcatggggagtggaagttc 320
Query: 121 gaggccagcctagactgcacaacaaggtcctgtctcaaaaacagaaacaaaagagacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggccagcctagactgcacaacaaggtcctgtctcaaaaacagaaacaaaagagacaaa 380
Query: 181 aagaaatctgagccacggcccactcctgctgcacaatgcagctctctgggcgtggttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaaatctgagccacggcccactcctgctgcacaatgcagctctctgggcgtggttgta 440
Query: 241 ggactgacgcctcg-tcccttgctgattgccagctcgtccactccactctagaccatgcc 299
||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggactgacgcc-cggtcccttgcggattgccagctcgtccactccactctagaccatgcc 499
Query: 300 ggccgtggaggatggcggtctctcctgtctctcgccccctgctttggctctagctccagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggccgtggaggatggcggtctctcctgtctctcgccccctgctttggctctagctccagt 559
Query: 360 cctgactgtccttgctcacattcaagggctcctgaggagggattgtccccagggtag--- 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctgactgtccttgctcacattcaagggctcctgaggagggattgtccccagggtagagt 619
Query: 417 cccttctgcttcccactctttgttctcgagcacatagccgcagagtccctctctgtcaga 476
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 c--ttctgcttcccactctttgttctcgagcacatagccgcagagtccctctctgtcaga 677
Query: 477 gtggctcgttcaca 490
||||||||||||||
Sbjct: 678 gtggctcgttcaca 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
