Query= MSMg01no074_c13.b1 MSMg01no074_c13.b1 CHROMAT_FILE:
MSMg01no074_c13.b1 PHD_FILE: MSMg01no074_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:26 2005
(348 letters)
>mm_chr2_38837650_38838398
Length = 749
Score = 578 bits (299), Expect = e-169
Identities = 335/347 (96%), Gaps = 3/347 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactctgtaca-catggctggcctcaaactcagaaacccgcctacctctgcctc 62
||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggaattcactctgtagacca-ggctggcctcaaactcagaaacccgcctacctctgcctc 591
Query: 63 ccaagtgctgtgaccaaaggcgtgcaccaccagtgccaggcaaaataaacatgtc-tttt 121
|||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 590 ccaagtgctgggattaaaggcgtgcgccaccagtgccaggcaaaataaacatgtcttttt 531
Query: 122 tttaaaaacaaaaacaaaaaagcatgtcttataaattgaatgtaaatgtttgttgcagga 181
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttttaaaacaaaaacaaaaaagcatgtcttataaattgaatgtaaatgtttgttgcagga 471
Query: 182 ggcacccgaccacatccaacaaacaatccagggaacaaaatgcacctgaggtaaagattt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggcacccgaccacatccaacaaacaatccagggaacaaaatgcacctgaggtaaagattt 411
Query: 242 ctctgccctctttcctggagcctccctcaccgttacccagggtcttgttcaccatgggtc 301
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 410 ctctgccctttttcctggagcctctctcaccgttacccagggtcttgttcaccatgggtc 351
Query: 302 attcctttgatcattttccaacaaaccctgccccaaccaaatcccag 348
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 350 attcctttgaccattttccaacaaaccctgccccaaccaaatcccag 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 749
Length adjustment: 9
Effective length of query: 339
Effective length of database: 740
Effective search space: 250860
Effective search space used: 250860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_c13.g1 MSMg01no074_c13.g1 CHROMAT_FILE:
MSMg01no074_c13.g1 PHD_FILE: MSMg01no074_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:26 2005
(285 letters)
>mm_chr2_38684974_38685658
Length = 685
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%)
Strand = Plus / Plus
Query: 1 ctaggcaaagtatttcccaactgcatctgtggatacatgtcaagttgccaacaactcagc 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ctaggcaaagtatttcccaactgcatctgtggatacatgtcaagttgaaaacaactcagc 260
Query: 61 ggcagtaagaagtaacaggtgtccttgactaatgttgagtgaccggcaaagggcaggtct 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 agcagtaagaagtaacaggtgtccttgactaatgctgagtgaccggcaaagggcaggtct 320
Query: 121 gcaacatgaacctttcagaacatgcacagcagtagattttctaaagcaaacaaaatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaacatgaacctttcagaacatgcacagcagtagattttctaaagcaaacaaaatggta 380
Query: 181 agagagataacatggtttagtaggctatcttaaaataggcatatctaagatgtgatattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagagataacatggtttagtaggctatcttaaaataggcatatctaagatgtgatattc 440
Query: 241 ccttagctctttactaactccctgaaaataaccagagcgaaggat 285
||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 441 ccttagctcttcactaactccctgaaaataaccagagcaaaggat 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
