Query= MSMg01no074_h04.b1 MSMg01no074_h04.b1 CHROMAT_FILE:
MSMg01no074_h04.b1 PHD_FILE: MSMg01no074_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:49 2005
(326 letters)
>mm_chr2_73425062_73425787
Length = 726
Score = 600 bits (310), Expect = e-176
Identities = 319/322 (99%)
Strand = Plus / Minus
Query: 5 gaattcttcattacctttattttttgatagtttttgtcagagtgtcaacagtggaatatt 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaattcttcattaattttattttttgatagtttttgtcagagtgtcaacagtggaatatt 467
Query: 65 cctagtccaaattgaaactaattaaaagttatttgaggaacacaagtgaagaacaatgtt 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cctagaccaaattgaaactaattaaaagttatttgaggaacacaagtgaagaacaatgtt 407
Query: 125 taacatttcacacctcctagaatagaaactcaggcagctgacgaatggagggtggaatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 taacatttcacacctcctagaatagaaactcaggcagctgacgaatggagggtggaatgt 347
Query: 185 tcatgatcttgactctaaatctcagcagagactaaagtttgcttatgtaactgacacaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcatgatcttgactctaaatctcagcagagactaaagtttgcttatgtaactgacacaat 287
Query: 245 cccaggattccgcgtggtccaatctttgcattggtccagttcagagaaatggagcagaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cccaggattccgcgtggtccaatctttgcattggtccagttcagagaaatggagcagaga 227
Query: 305 acacgtcttttctctcttgaga 326
||||||||||||||||||||||
Sbjct: 226 acacgtcttttctctcttgaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_h04.g1 MSMg01no074_h04.g1 CHROMAT_FILE:
MSMg01no074_h04.g1 PHD_FILE: MSMg01no074_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:49 2005
(247 letters)
>mm_chr2_73265589_73266235
Length = 647
Score = 431 bits (223), Expect = e-125
Identities = 241/247 (97%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 ttccct-tactacagcctgtgtacgctgtgggagtagcagaatgatatacagccaactgt 59
|||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccctct-ctacagcctgtgtacactgtgggagtagcagaatgatatacagccaactgt 259
Query: 60 tactgagcaccaggtatgcactgttttctctgatgtttgtgtatggattgttgtaagcac 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tactgagcaccaggtatgcgctgttttctctgatgtttgtgtatggattgttgtaagcac 319
Query: 120 tgtacactggatgaaggcagtgcagagggcttcaataacccatccatggcctcacagagg 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtacactggacgaaggcagtgcagagggcttcaataacccatccatggcctcacagagg 379
Query: 180 aagcgcccaagtcagtatccaaacctgtgtgtgtgtgtttgtgtatggtgtgtatgtata 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 aagcgcccaagtcagtatccaaacctgtgtgtgtgtgtttgtgtatggtgtgtatgtaca 439
Query: 240 tgtgtgt 246
|||||||
Sbjct: 440 tgtgtgt 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
