Query= MSMg01no076_f06.b1 MSMg01no076_f06.b1 CHROMAT_FILE:
MSMg01no076_f06.b1 PHD_FILE: MSMg01no076_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:15 2005
(648 letters)
>mm_chr2_73924443_73925490
Length = 1048
Score = 1234 bits (638), Expect = 0.0
Identities = 641/642 (99%)
Strand = Plus / Plus
Query: 7 gaattcatacaggcttgagactaagccacattgtgtgggcttaaaattttgacttatctg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcatacaggcttgagactaagccacattgtgtgggcttaaaattttgacttatctg 266
Query: 67 ggtctgtcaataatagagtgatctcttgaaatcaagtttatgaggaccaagctaaggtgg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtctgtcaataatagagtgatctcttgaaatcaagtttatgaggaccaagctaaggtgg 326
Query: 127 ctgatgcatagaaatcgtacctgctaatttgccagtgtcattgacagtagaaacatattt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgatgcatagaaatcgtacctgctaatttgccagtgtcattgacagtagaaacatattt 386
Query: 187 gtctttagaatgtacatgtttcagggttaggaaagactttaagtattttatccctattgg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtctttagaatgtacatgtttcagggttaggaaagactttaagtattttatccctattgg 446
Query: 247 gggctgaactgtaatcagaaggggacttggtgaaacaaaacaaaagctagaccaaacaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gggctgaactgtaatcagaaggggacttggtgaaacaaaacaaaagctagaccaaacaaa 506
Query: 307 tattggattatgtccaatagtataacttcatgcttcataatgatggaaatgatcttgccc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tattggattatgtccaatagtataacttcatgcttcataatgatggaaatgatcttgccc 566
Query: 367 aagagttaaaaaaatctaagagctgaaggtcctctctagggacggtgacttctaatcttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aagagttaaaaaaatctaagagctgaaggtcctctctagggacggtgacttctaatcttt 626
Query: 427 gtttctgaaatatttcattgtctttgcattggctctagtttatacatggtcaagtgctgg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtttctgaaatatttcattgtctttgcattggctctagtttatacatggtcaagtgctgg 686
Query: 487 ggcgtaaagaggactcccagctccctgcatcactttgtccatgtaggtcatgtagtcact 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 687 ggcgtaaagaggactcccagctccctgcatcactttgtccatgtaggtcatgtaggcact 746
Query: 547 ggatcaagcagtggtgggctgggattaatgttaaaagtacctgtggggcagcaagatggc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ggatcaagcagtggtgggctgggattaatgttaaaagtacctgtggggcagcaagatggc 806
Query: 607 ttagcagggtacaggtgcattgtggccatgcctcacatcctg 648
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttagcagggtacaggtgcattgtggccatgcctcacatcctg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_f06.g1 MSMg01no076_f06.g1 CHROMAT_FILE:
MSMg01no076_f06.g1 PHD_FILE: MSMg01no076_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:16 2005
(627 letters)
>mm_chr2_74051480_74052508
Length = 1029
Score = 1137 bits (588), Expect = 0.0
Identities = 619/630 (98%), Gaps = 4/630 (0%)
Strand = Plus / Minus
Query: 1 tcagaaagaaaagaaagaaaaccgaagaaagagcttaaagagaccaatttatatgtaaaa 60
|||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 829 tcagaaagaaaagaaagaaaactgaagaaagagtttaaagagaccgatttatatgtaaaa 770
Query: 61 agatcaaaaaaagatgaggtaatttttttaaaaaggcccatgctcttgacattagttcct 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agatc-aaaaaagatgaggtaatttttttaaaaaggcccatgctcttgacattagttcct 711
Query: 121 ggtctctgcaaaattcattttattcttataatgaccttctctttttataaag-aaatact 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 710 ggtctctgcaaaattcattttattcttataatgaccttctctttttataaagaaaatact 651
Query: 180 --cccccccctttattgaccaaactgtaatgagaaaataagaagtttaatgccagtgggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tccccccccctttattgaccaaactgtaatgagaaaataagaagtttaatgccagtgggt 591
Query: 238 tattgttacctccccgccccctgaaaagcctgggaaagaattggctccaattaatgtaga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tattgttacctccccgccccctgaaaagcctgggaaagaattggctccaattaatgtaga 531
Query: 298 agccactctattcctattaaaatataatgcggttaataaagcgttacctggaaataaaaa 357
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 530 agccactctattcctattaaaatataatgcggttaataaagtgttagctggaaataaaaa 471
Query: 358 tgtaagtatagtgaaatgcaaatgtaggtgcaaacaccgagctattacatccgcccatgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgtaagtatagtgaaatgcaaatgtaggtgcaaacaccgagctattacatccgcccatgt 411
Query: 418 tgacttctgtagtggagaaaaaatatccatgatgctttcagcgaatggaatagtatgcga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgacttctgtagtggagaaaaaatatccatgatgctttcagcgaatggaatagtatgcga 351
Query: 478 atgtactggaatgtcctcttcaggtctggaagcttgtgatttcatactttaattcctgca 537
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 350 atgtactggaatgtcgtcttcaggtctggaagcttgtgatttcagactttaattcctgca 291
Query: 538 cacaaactgactttaaaaagcaaaggtttgaaacagataaagcaacattttgcctaaagt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cacaaactgactttaaaaagcaaaggtttgaaacagataaagcaacattttgcctaaagt 231
Query: 598 tcattcatcaaagggccgcatattttgaaa 627
||||||||||||||||||||||||||||||
Sbjct: 230 tcattcatcaaagggccgcatattttgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1029
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1019
Effective search space: 628723
Effective search space used: 628723
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
