TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTAGCTCTGAGCCCCATATTTTAATGGGGTTATTTGATTT
TTCTGGAGTCTACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCC
CTATATGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
TTTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCC
TGAGGTCCCATTTGTCAATTCTCAATCTTACAGCACAAGCCGTTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCTAC
TTTCTCTTCTATAAGTTTCAGTGTCTCTGGTTTTATGTAATGTTCCTTGA
TCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCAATTCGC
ATTCTTCTGCATGTTTACAATCAGTTGTGCCAGCGCCATTTGTTGAAAAT
TGCTGTCTTTCTTCCATTTGATGGTTTTAGCTCCCTTGTCTAATATTACG
TGATCATACGTGCGCGCGTTCCTTTCCTAATCTTCTATTCCCCCCCCCCG
CCCTTTTTCGCTCCGTCTTTACTCCCCTTCCCTGTTCTTTTTTACCTCTT
TTGTCTCCCTACTCTATCCTTCTCATCTCCTTCTACTCTTTTTGCCCCTT
TTTCCTCCTCTTCTTTCCCCCCCC

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGCAGATGCTCTGTGGGGTTTAAAAGTCAGCG
CTGTGACCAGAAAGAGAACCCTTGTGATCACTACTGTCAGAATGAGGGGA
TTTGCACTTTAACTGCGTTTAATGAGCCGAGATGCAAGTAGGTTTAACCT
TCCACTTACTGCTGTGCTTCCTGTGACATCATTTCAGGCCACAGTTCATT
GGTTTAAATCATGAACATCCACATGCATTTCACAGTGTATACTTAATCTT
GGGGCTCATCTCTGTCACATTTAATTAACCTATGCTTTGCTCATAGATAA
CTGTATACACTGCAGACCACTAGAGTGTGCAGAAATATAGCAGACGATAA
AAATGCTACTCATCCTGGTTCCTAAAAACATGTATGCTAGAAAGGTAGAT
TCTAATCCCAGGAAAACAGAAGCAAGTGGTTTAAAGTCTGTCACTACTAT
ATTTGGAACAGTGGATTTTAAGTTCAACATTTCTACTTCAAAATCTGATG
GGCTAGTAAACAATTTGTTTCTTATATTTACATTGGAGGCTGTTTGATTT
ACTAAGAAAGGAAATAAATGCCTGCCAACGTATTTCTAGAAATTTAATTT
CTTGAAAGCTTACTTCATTCTTCCTTCCTGCAGCGTGATATTGGATATTC
ATGGAAAGAA

Query= MSMg01no078_a12.g1 MSMg01no078_a12.g1 CHROMAT_FILE:
MSMg01no078_a12.g1 PHD_FILE: MSMg01no078_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:13 2005
         (484 letters)



>mm_chr2_40483593_40484476
          Length = 884

 Score =  905 bits (468), Expect = 0.0
 Identities = 480/484 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcagatgctctgtggggtttaaaagtcagcgctgtgaccagaaagagaacccttgtgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgcagatgctctgtggggtttaaaagtcagcgctgtgaccagaaagagaacccttgtgat 625

                                                                       
Query: 61  cactactgtcagaatgaggggatttgcactttaactgcgtttaatgagccgagatgcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cactactgtcagaatgaggggatttgcactttaactgcgtttaatgagccgagatgcaag 565

                                                                       
Query: 121 taggtttaaccttccacttactgctgtgcttcctgtgacatcatttcaggccacagttca 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taggtttaaccttccacttaccgctgtgcttcctgtgacatcatttcaggccacagttca 505

                                                                       
Query: 181 ttggtttaaatcatgaacatccacatgcatttcacagtgtatacttaatcttggggctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttggtttaaatcatgaacatccacatgcatttcacagtgtatacttaatcttggggctca 445

                                                                       
Query: 241 tctctgtcacatttaattaacctatgctttgctcatagataactgtatacactgcagacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctctgtcacatttaattaacctatgctttgctcatagataactgtatacactgcagacc 385

                                                                       
Query: 301 actagagtgtgcagaaatatagcagacgataaaaatgctactcatcctggttcctaaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 384 actagagtgtgcagaaatatagcagacgataaaaatgctactcatcctggttcctaaaac 325

                                                                       
Query: 361 catgtatgctagaaaggtagattctaatcccaggaaaacagaagcaagtggtttaaagtc 420
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgtatgctagaaaggtggattctaatcccaggaaaacagaagcaagtggtttaaagtc 265

                                                                       
Query: 421 tgtcactactatatttggaacagtggattttaagttcaacatttctacttcaaaatctga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 264 tgtcactactatatttggaacagtggattttaagttcaacatttctacttcaaaatctgt 205

               
Query: 481 tggg 484
           ||||
Sbjct: 204 tggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)