Query= MSMg01no078_i17.b1 MSMg01no078_i17.b1 CHROMAT_FILE:
MSMg01no078_i17.b1 PHD_FILE: MSMg01no078_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:54 2005
(295 letters)
>mm_chr2_81977087_81977781
Length = 695
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%)
Strand = Plus / Plus
Query: 1 atagtttgtgaagtcctttgaacttaagagttaaggaaattcaatttttatagcacattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 atagtttgtgaagtcctttgaacttaagagttaaggaaattcaatttttatagtacattt 260
Query: 61 ttgaagaatgaaaagtataaaaatatcatagctgacctttctaagatatcagaagttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaagaatgaaaagtataaaaatatcatagctgacctttctaagatatcagaagttggg 320
Query: 121 atgcactttccttctgtcattttcccagcacatgatgctcccgcaacagaaatatgattc 180
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 321 atgcactttccttctgtcattttcccagcacatgatgctcccataacagaagtatgattc 380
Query: 181 tacagtgttgaagctggcaatcaaggagaatctagattgagctagttccatctaacggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tacagtgttgaagctggcaatcaaggagaatctagattgagctagttccatctaagggtg 440
Query: 241 tcagtgtgatctttgataccacgctcttaagatgggtcagttcttatatagagaa 295
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgtgatctttgataccatgctcttaagatgggtcagttcttatatagagaa 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no078_i17.g1 MSMg01no078_i17.g1 CHROMAT_FILE:
MSMg01no078_i17.g1 PHD_FILE: MSMg01no078_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:54 2005
(303 letters)
>mm_chr2_82125928_82126630
Length = 703
Score = 509 bits (263), Expect = e-148
Identities = 293/303 (96%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 1 gcttgatagac-catccttataggaagagaggaagttcaacctgcaatttggtcacatga 59
||||||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||
Sbjct: 502 gcttgatagacacatccttacaggaagagaggaagttcaacctgtaatttggccacatga 443
Query: 60 ttacttcaagggtggcagaggtgtgggtcacaagtctatgtgagctgggacaggcaggtc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 442 ctacttcaagggtggcagaggtgtgggtcacaagtctatgtgagctgggacaggcaggcc 383
Query: 120 cagagcagggaggaaaaacagttttactcctgcaggtatcacagtgaggttttccatatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cagagcagggaggaaaaacagttttactcctgcaggtatcacagtgaggttttccatatt 323
Query: 180 tgtacaattctcgaactcattcttcgttggactagctccccccagtcacaaagctttctg 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 322 tgtacaattctcgaactcattcttcgttggactagct-cccccagtcacaaagctttctg 264
Query: 240 accctattcatctctaccctaacaaatataagtattccaggaaaatgattattagacttc 299
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 263 accctacacatctctaccctaacaaatataagtattccaggaaaatgattaatagacttc 204
Query: 300 tta 302
|||
Sbjct: 203 tta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
