Query= MSMg01no080_n07.b1 MSMg01no080_n07.b1 CHROMAT_FILE:
MSMg01no080_n07.b1 PHD_FILE: MSMg01no080_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:51 2005
(310 letters)
>mm_chr2_115321857_115322566
Length = 710
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%)
Strand = Plus / Minus
Query: 5 gaattcctcctgtaccaggactgagacagcttgggtagtgcagctgtgaattacaggtgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaattcctcctgtaccaggactgagacagcttgggtagtgcagctgtgaattacaggtgg 451
Query: 65 ctctgagcctcctgactatgcaagtgagtgtcctaacagcaatggcacacagactgtatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctctgagcctcctgactatgcaagtgagtgtcctaacagcaatggcacacagactgtatt 391
Query: 125 ttcagggtttaggagctgatggattacctaccccagactgcataagaaacagataccaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttcagggtttaggagctgatggattacctaccccagactgcataagaaacagataccaag 331
Query: 185 ataaatagcagaagaaaatacagtaggaattaggtataaatcactggaagataataggta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ataaatagcagaagaaaatacagtaggaattaggtataaatcactggaagataataggta 271
Query: 245 agaatttctggtgatttgctttacatgaatgtcaccatttcattgaccttaaggctatta 304
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 270 agaatttctggtgatttgctttacatgaaagccaccatttcattgaccttaaggctatta 211
Query: 305 cataga 310
||||||
Sbjct: 210 cataga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_n07.g1 MSMg01no080_n07.g1 CHROMAT_FILE:
MSMg01no080_n07.g1 PHD_FILE: MSMg01no080_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:51 2005
(311 letters)
>mm_chr2_115193093_115193803
Length = 711
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%), Gaps = 2/310 (0%)
Strand = Plus / Plus
Query: 3 cttatcttattttatttttcttaagacaagagtcttattgtgttcccaggctgggcctca 62
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttattttattttatttttcttaagacaagagtcttattgtgttcccaggctgggcctca 262
Query: 63 aactgagaatcctcctgcctcaggctctcaggctggaagtactggcatgtaccaccatgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aactgagaatcctcctgcctcaggctctcaggctggaagtactggcatgtaccaccatgt 322
Query: 123 ttaggaaaaaattccattcactaggccattgagtcattcacacagctttccgacaagctc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttaggaaaaaattccattcactaggccattgagtcattcacacagctttccgacaagctc 382
Query: 183 tctccaagtctgtcagtctgagctgttgagaacata-tcccaacttcaatgcacatgtaa 241
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 383 tctccaagtctgtcagtctgagctgttgagaacatagtcc-aacttcaatgcacatgtaa 441
Query: 242 ttctgacacttgttattttacccgaagcacttattcacattacagtgaagctgattattt 301
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 ttctgacacttgttattttacccgaagcacttattcacattacactgaagctgattattt 501
Query: 302 ttgctgaatg 311
||||||||||
Sbjct: 502 ttgctgaatg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
