Query= MSMg01no081_c09.b1 MSMg01no081_c09.b1 CHROMAT_FILE:
MSMg01no081_c09.b1 PHD_FILE: MSMg01no081_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:16 2005
(566 letters)
>mm_chr2_122400802_122401766
Length = 965
Score = 1079 bits (558), Expect = 0.0
Identities = 564/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 1 ctgggtaaagctattttgataagctaaaatctcagagtactgccattcatgtaaaggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctgggtaaagctattttgataagctaaaatctcagagtactgccattcatgtaaaggcag 706
Query: 61 cagccaacgatggggagacacgctgccaaggtcagtgtgtcgctggcagcagaaaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cagccaacgatggggagacacgctgccaaggtcagtgtgtcgctggcagcagaaaatgca 646
Query: 121 actcagcagtgtccactgccaacgctgcagcccgaagagtcccttggagcctcccggggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 actcagcagtgtccactgccaacgctgcagcccgaagagtcccttggagcctcccggggc 586
Query: 181 ctctgctcaggtccttgacttccaccacaggaggagatcctggatgagtcagcggataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctctgctcaggtccttgacttccaccacaggaggagatcctggatgagtcagcggataaa 526
Query: 241 agttagtgagcttgtccactaagcagaaagatctggctcacttcatgagagtcaagcgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agttagtgagcttgtccactaagcagaaagatctggctcacttcatgagagtcaagcgtg 466
Query: 301 ggggttaggagaggaggagcgagcattcctaattgcctgggcagtaactacataagcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggggttaggagaggaggagcgagcattcctaattgcctgggcagtaactacataagcgat 406
Query: 361 ttgggggctcttaattaatctgcaactaaatttccatattggggaaatcacattctgcca 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tt-ggggctcttaattaatctgcaactaaatttccatattggggaaatcacattctgcca 347
Query: 421 ttccacttttccatatatttggaactatatccatgacgatgaggctttaaattgatttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttccacttttccatatatttggaactatatccatgacgatgaggctttaaattgatttta 287
Query: 481 gctggagaaggacaagctgtagagacaaaacattgcccaaaacttttagtgacttattca 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 286 gctggagaaggacaagctgtagagacaatacattgcccaaaacttttagtgacttattca 227
Query: 541 taggtcactaagggattgtctttcag 566
||||||||||||||||||||||||||
Sbjct: 226 taggtcactaagggattgtctttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space: 530980
Effective search space used: 530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_c09.g1 MSMg01no081_c09.g1 CHROMAT_FILE:
MSMg01no081_c09.g1 PHD_FILE: MSMg01no081_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:16 2005
(467 letters)
>mm_chr2_122253938_122254804
Length = 867
Score = 903 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Plus
Query: 1 tttatttaatatatgtgagtgcactgtcgctgtcttcagacacaacagaagatggcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttaatatatgtgagtgcactgtcgctgtcttcagacacaacagaagatggcatca 260
Query: 61 gatcccattacagatggttgtttgtcaccatgtgttttctgggaattgaactcaggacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcccattacagatggttgtttgtcaccatgtgttttctgggaattgaactcaggacgt 320
Query: 121 ttggaagagtaatcagtgttcttaaccactgagccatctctccagcccatgcttgcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggaagagtaatcagtgttcttaaccactgagccatctctccagcccatgcttgcactc 380
Query: 181 tttaaattctagttgagctttccatttcccactcaggcttaatgtcctctccttctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaattctagttgagctttccatttcccactcaggcttaatgtcctctccttctgaag 440
Query: 241 atgctgtgcttgtcatccactgcgatagatgtgggacttaagccctcattctcctgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgctgtgcttgtcatccactgcgatagatgtgggacttaagccctcattctcctgtttc 500
Query: 301 cctgttattcaaatagcacctataattttccttgcaaaagaaataaacccaggggcacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgttattcaaatagcacctataattttccttgcaaaagaaataaacccaggggcacag 560
Query: 361 cctgaaatgggcatgaggcatagtcatgagatagaatcacttttcttggaaaactccact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgaaatgggcatgaggcatagtcatgagatagaatcacttttcttggaaaactccact 620
Query: 421 gcctgtcagaacaaatgctacctccaacttgaggagagatgagttct 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctgtcagaacaaatgctacctccaacttgaggagagatgagttct 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
