XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TAGCTTACCCCCTTTTTTCTGTTTCAATCAGATGGAGGAAAAGAATGAAT
AAAGGTTCATAAATACACCTTCATTGTAACTCTCTATATGTACTTGCTTC
TTGGAGTTAACTTAAGTACTCCTAAGAAGTGTCTCTAAAATAGAGGGAAG
AAAGCATCAGTATTTGTTACAACTTTTTCCTTCTTTTTTCTTGCTTTTTT
GAGAATATTATTTCTGCCCCTTACCATTAACATGTTTAGAAAACTGTCCC
TAATCAGTAATTTGTATCTACAACCTAGAGTTAAAACTGCTTATTTTTCT
TTGAATATGGGCTGGTACAAAATTTGCCTTGCCTCATTCTCTGGCTGTAT
GTATTACAACAACTTCATACTGAACAGGAACAAAGAGAATCTGTAGGGCT
TAATAACTGATAAGGAAAGGAATATAATTTTCAGAATCTCCTGAAAAGCA
ATAGAGAGTAAAATACCATTAAAATAAAGATGCCTTCAGAACAGCGGCAT
TCTTTGAAAAAGCCCACTTGGAGGTAACTGTAGGTTGATGGCCCATTTAT
CATCCCCCTACTCATCAGCTTATGAAAAATTATGGTATTAAAAAGGCCCA
CTGTGTCTTGTAGATATAAAGTCAGAAAATCAATTTGTGAATCATAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACCTGAAAAAATGTTCAACACACTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA
TTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTC
TGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAATACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATA
TTAGCCCCAAACCTAGGATTCCCAAGATATAAGGTACAATTTCCTTAACA

Query= MSMg01no082_b19.b1 MSMg01no082_b19.b1 CHROMAT_FILE:
MSMg01no082_b19.b1 PHD_FILE: MSMg01no082_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:30 2005
         (660 letters)



>mm_chr2_66750589_66751648
          Length = 1060

 Score = 1116 bits (577), Expect = 0.0
 Identities = 637/657 (96%), Gaps = 2/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttagcttacccccttttttctgtttcaatcagatggaggaaaagaatgaataa 64
           |||||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||
Sbjct: 860 gaattctttagcttagtcccttttttccatttcagtcagatggaggaaaagaatgaataa 801

                                                                       
Query: 65  aggttcataaatacaccttcattgtaactctctatatgtacttgcttcttggagttaact 124
           | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 800 aagttcataaatacaccttcattgtaactgtctatatgcacttgcttcttggagttaact 741

                                                                       
Query: 125 taagtactc-ctaagaagtgtctctaaaatagagggaagaaagcatcagtatttgttaca 183
           ||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 740 taagtactcac-aagaaatgtctctaaaatagagagaagaaagcatcagtatttgttgca 682

                                                                       
Query: 184 actttttccttcttttttcttgcttttttgagaatattatttctgccccttaccattaac 243
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actttttccttctattttcttgcttttttgagaatattatttctgccccttaccattaac 622

                                                                       
Query: 244 atgtttagaaaactgtccctaatcagtaatttgtatctacaacctagagttaaaactgct 303
           ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 atgcttagaaaactgtccctaatcagtaatttgtagctacaacctagagttaaaactgct 562

                                                                       
Query: 304 tatttttctttgaatatgggctggtacaaaatttgccttgcctcattctctggctgtatg 363
           ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 561 tatttttctttgagtatgggctggtacaaaattcgccttgcctcactctctggctgtatg 502

                                                                       
Query: 364 tattacaacaacttcatactgaacaggaacaaagagaatctgtagggcttaataactgat 423
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattacaacaacttcatactggacaggaacaaagagaatctgtagggcttaataactgat 442

                                                                       
Query: 424 aaggaaaggaatataattttcagaatctcctgaaaagcaatagagagtaaaataccatta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggaaaggaatataattttcagaatctcctgaaaagcaatagagagtaaaataccatta 382

                                                                       
Query: 484 aaataaagatgccttcagaacagcggcattctttgaaaaagcccacttggaggtaactgt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaataaagatgccttcagaacagcggcattctttgaaaaagcccacttggaggtaactgt 322

                                                                       
Query: 544 aggttgatggcccatttatcatccccctactcatcagcttatgaaaaattatggtattaa 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttgatggcccatttatcatccccctactcatcagcttatgaaaaattatggtattaa 262

                                                                    
Query: 604 aaaggcccactgtgtcttgtagatataaagtcagaaaatcaatttgtgaatcatagg 660
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggcccactgtgtcttgtagatataaagtcagaaaatcaatttgtgaatcatagg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)