AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTCACCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGGAGTCCACCTTCTTGAGTTCTAGTTCTGTTAGTTTCACTTTGTCT
CTGTTTAGTTTCTGTTTCCAGGATCTGTCCATTGATGAGAGTGGGGTGTT
GAAGTCTCCCACTATTATTGTGTGTGGTGAAATGTGTGCTTTGAGCTTTA
GTAAAGTTTTTTTTATGAATGTGTATTCCCTTGCATGAATATCACCGCTA
TGCTGATTAGATACTCCTTCTCATTACCTTTTTTCCTTTGTTCCATATGT
TATGTCCTTTTCTTCTCTTCTCTTTCTACTTTCTTTTTCGTACTTCCTAT
CTTCTTTTATTTTTCCTACACCCACATTCCTCTCCTTTCCCTGTTCTATT
TACTTTTCCTTTTACCATCTTTTTTCTTTACCTTCTTTCTTTTTTGTCTT
CTCCCTTTTCTTCTCTCTTCTTTCTTTATCTTTTATCTATGTTATTCTTA
TTTAATTAATTATCACATATTTTTTTTTTTTAATTATTAATCCCTTCCTT
ACGAAACTTATATCCTTTCTTCCTTTTACTCCCTTAATATCTTCTCTCCC
CTTCTATTTTGTCTCTCCTTATACATCTGCTTACTGACCTCTCCTTTTTA
TTCTATTTTCTCCCTTCCCTCCTGTTTGTCTCAA

CCGATACAGNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTCTTTAATACATACACATGTAT
TTATTCTTTAATGTTTTATGTATGTATGTATAACTGTATATATATATATA
TATATATATATACACACACATGTATGTATGTGTACATGTATGTATATGTT
CTTACACAAAAACATGCACATACATACACAGTGTGTGTGTATGCTGCATG
AGCATTAACAGTGATTAAGATTAGAATAAAGAATTTTCATTCACCTTGTC
CAAGCTACCAAGGTGGGTGGATTTTATTACAAATTATAGGCATTGAAACT
GCTAAACTTTATGAATTTGTTATTAAATATATGGTGATATTGTGAAAAGA
AACAAACATTTCCATGCATGTTTCTAATGTAACTCACTCCTGACAGCATC
AGTCCTGTTATCCTATATGCTACCTCAAATTTGCATTAATGAAATGTTAA
TGTACCTTCAATATATTTTACTACATCTTTTTATTATCCTTATACTATCC
CTCTCTTTCTTCCTCTCCTACTTTCCTCTCTACCATTCCTTCCTTTCTTT
TTCTTCCTTTTCTTCCTTTCCTACCTCATCCCTACTCTTATCTATCTTCT
TTAAATCTTTATTCTTTATCTTCTCATTTCCTTTA

Query= MSMg01no083_c03.g1 MSMg01no083_c03.g1 CHROMAT_FILE:
MSMg01no083_c03.g1 PHD_FILE: MSMg01no083_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:47 2005
         (320 letters)



>mm_chr2_17316823_17317544
          Length = 722

 Score =  485 bits (251), Expect = e-141
 Identities = 307/335 (91%), Gaps = 18/335 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctttaatacatacacatgtatttattctttaatgttttatgtatgtatgtataactg 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 attctttaacacatacacatgtatttattctttaatgttttatgtatgtatgtataactg 246

                                                                       
Query: 61  --------------tatatatatatatatatatatatatacacacacatgtatgtatgtg 106
                         |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 247 tatatatatatatatatatatatatatatatatatatatatatacacatgtatgtatgtg 306

                                                                       
Query: 107 tacatgtatgtatatgttcttacacaaaaacatgcacatacatacacag--tgtgtgtgt 164
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 307 tacatgtatgtatatgttcttacacaaaaacatgcacatacatacacagtatgtgtgtgt 366

                                                                       
Query: 165 atgctgcatgagcattaacagtgattaagattagaataaagaa-ttttcattcaccttgt 223
            |||||| |||||||||||||| ||||| |||||||| ||||| |||| |||||||||||
Sbjct: 367 gtgctgcgtgagcattaacagtaattaaaattagaattaagaactttt-attcaccttgt 425

                                                                       
Query: 224 ccaagctaccaaggtgggtggattttattacaaattataggcattgaaactgctaaactt 283
           |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 426 ccaagctaccaaagtgggtggattttattacaaattatgggcattgaaactgctaaactt 485

                                              
Query: 284 tatgaatttgttattaaatatatggtgatattgtg 318
           |||||||||||||||||||||||||||||||||||
Sbjct: 486 tatgaatttgttattaaatatatggtgatattgtg 520



 Score = 54.9 bits (28), Expect = 7e-12
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 61  tatatatatatatatatatatatataca 88
           ||||||||||||||||||||||||||||
Sbjct: 272 tatatatatatatatatatatatataca 245



 Score = 54.9 bits (28), Expect = 7e-12
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 59  tgtatatatatatatatatatatatata 86
           ||||||||||||||||||||||||||||
Sbjct: 292 tgtatatatatatatatatatatatata 265


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 320
Length of database: 722
Length adjustment: 9
Effective length of query: 311
Effective length of database: 713
Effective search space:   221743
Effective search space used:   221743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)