Query= MSMg01no083_e09.b1 MSMg01no083_e09.b1 CHROMAT_FILE:
MSMg01no083_e09.b1 PHD_FILE: MSMg01no083_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:57 2005
(411 letters)
>mm_chr2_103233919_103234730
Length = 812
Score = 706 bits (365), Expect = 0.0
Identities = 395/405 (97%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 7 gaattctatgtgttcta-ttaaatttccatttctctgataaga-gtaaacatctggtttg 64
|||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 610 gaattctatgtgttttagttaaatttccatttctctgataagatgtaaacatctggtttg 551
Query: 65 ctgatttagttgttcatgccccaggacttaagccttcctacccactccttccccacaagt 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 550 ctgatttagttgttcatgccccaggacttaagccttcctacccactcc-tccccacaagt 492
Query: 125 gtaggagaaaccagggacataacattgtttcttcactgggatggactgtacatcagggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtaggagaaaccagggacataacattgtttcttcactgggatggactgtacatcagggga 432
Query: 185 taaatgtgtgtaagcatctcttctgttaaggtaggaatacttaattagggagacatctaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 taaatgtgtgtaagcatctcttctgttaaggtaggaatacttaattagggagacatctaa 372
Query: 245 agtttaaaccatagcagagtgcttggagatactatcatgaagggccatcaaataagagtg 304
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 371 agtttaaaccatagcagagtgcttggagataccatcatgaagggtcatcaaataagagtg 312
Query: 305 gtgctgttatttctgtttagttatccttatcattgcaatgccttgagcatggggaccatg 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtgctattatttctgtttagttatccttatcattgcaatgccttgagcatggggaccatg 252
Query: 365 tttctccatcttttggtctcagcaggcagtttataccttttggag 409
|||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 251 tttctccatcttttggtctcagcaggcagtctaggccttttggag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 812
Length adjustment: 9
Effective length of query: 402
Effective length of database: 803
Effective search space: 322806
Effective search space used: 322806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_e09.g1 MSMg01no083_e09.g1 CHROMAT_FILE:
MSMg01no083_e09.g1 PHD_FILE: MSMg01no083_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:57 2005
(453 letters)
>mm_chr2_103103448_103104299
Length = 852
Score = 785 bits (406), Expect = 0.0
Identities = 440/454 (96%), Gaps = 7/454 (1%)
Strand = Plus / Plus
Query: 1 aattctttcattaaacagaaattgtttgaatttaacagcttaaggggaaagagtcatgat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aattctttcattaaacataaattgtttgaatttaacagcttaaggggaaagagtcatgat 262
Query: 61 ttaaaaaaaataataaaaataaaaatgaaaataaaaataaaacagtggcagaagggttgt 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tt--aaaaaataataaaaataaaaatgaaaataaaaataaaacagtggcagaagggttgt 320
Query: 121 cgcccaccaattatcaacccagaagccagatggcaagaagagtgagatttatacagatag 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 cgcccaccaattatcaacccagaagccaggtggcaagaagagtgagatttatacagatag 380
Query: 181 ctacagaatgattaatccaaattcagctgaactctgaagtctacatgtttcaaaagtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacagaatgattaatccaaattcagctgaactctgaagtctacatgtttcaaaagtttg 440
Query: 241 tgagatgcagttttt--atgaagtttggttttcttaatggtctcctttattccagaaact 298
|||||| ||| || | |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgagatacag---ttccaagaagtttggttttcttaatggtctcccttattccagaaact 497
Query: 299 gagtcctgagcccccagctgagggtaactcacctgttaacactaagtttgccacgctggt 358
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 498 gagtcctgagtccccagctgagggtaactcacctgttaacactaagtttgccatgctggt 557
Query: 359 gtttccttctcttagtcagtattcctctgcaggtccagatcgtgtgacttttatagtcta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtttccttctcttagtcagtattcctctgcaggtccagatcgtgtgacttttatagtcta 617
Query: 419 ttctctcacatatactcctcacatatatggtgtt 452
||||||||||||||||||||||||||||||||||
Sbjct: 618 ttctctcacatatactcctcacatatatggtgtt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
