Query= MSMg01no083_o11.b1 MSMg01no083_o11.b1 CHROMAT_FILE:
MSMg01no083_o11.b1 PHD_FILE: MSMg01no083_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:46 2005
(410 letters)
>mm_chr2_128024175_128024984
Length = 810
Score = 663 bits (343), Expect = 0.0
Identities = 388/403 (96%)
Strand = Plus / Plus
Query: 8 gaattctagtgtccttccgtctcctgcacttggtaatgtccatctttctcatggaagccg 67
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 208 gaattctagtgtctttccgtctcctgcacttggtagtgtccatctttctcatggaagcca 267
Query: 68 ctcagaagtgtgtgtggtggtgttacacagtgactgcagtctgcatttccctagtgacga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctcagaagtgtgtgtggtggtgttacacagtgactgcagtctgcatttccctagtgacga 327
Query: 128 gtgatactgctgcttgcacagctgcagagatagctctccagatggccaccaccttctcag 187
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 328 gtgatactgctgcttgcacagctgcagagatagctctccagatggccaccatcttctcag 387
Query: 188 ttacgctattttcttctcattgagcttttacgatttttaaaaatgttctggatataagtc 247
||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 388 ttatgctattttcttctcattgagcttttacgatttttaaaatttttcaggatataagtc 447
Query: 248 tattgtaagatatatgtgcattagggacgtataggtcagaggttaagagtgctcttccag 307
||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||
Sbjct: 448 tattgtaagatatatgtgcattagggatggagaggtcagaagttaagagtgctcttccag 507
Query: 308 aagacctgtgtttgattcccagcacctacatggcagctcacaactgtaactccagttcca 367
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 508 aagacctgggtttgattcccagcacctacatggcagctcacaactgtaactctagttcca 567
Query: 368 gagcacctaatactctactctggcctacacacacacacacaca 410
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaggacctaatactctactctggcctacacacacacacacaca 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_o11.g1 MSMg01no083_o11.g1 CHROMAT_FILE:
MSMg01no083_o11.g1 PHD_FILE: MSMg01no083_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:46 2005
(539 letters)
>mm_chr2_128153757_128154697
Length = 941
Score = 750 bits (388), Expect = 0.0
Identities = 404/410 (98%), Gaps = 2/410 (0%)
Strand = Plus / Minus
Query: 1 actccccctcagtcttatgggtgcattatggcatcttgctgtgactacatattgtcacta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 actccccctcagtcttatgggtgcactatggcatcttgctgtgactacatattgtcacta 351
Query: 61 tatagtcagtctttatcttcactcacatctgctctaagtatttctctttaa--ttttttt 118
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 350 tatagtcagtctttatcttcactcacatctgctctaagtatttctctttaattttttttt 291
Query: 119 ttaatcacattcagggtatgtatgtgtgtgtgtatgtgtgcacattcattttgcttatgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttaatcacattcagggtatgtatgtgtgtgtgtatgtgtgcacattcattttgcttatgg 231
Query: 179 cactttcagaccttagattttcattttctccttcctatttttgacttttgtttcatgagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cactttcagaccttagattttcattttctccttcctatttttgacttttgtttcatgagt 171
Query: 239 acaagagtaccaccactgcactttgaaacattcttatgatagatgccttaaaatgaaaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acaagagtaccaccactgcactttgaaacattcttatgatagatgccttaaaatgaaaat 111
Query: 299 gtttgtcagatgggctgggagtggtagtgcatacctttaacccaagcactcggtaggcag 358
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 110 gtttgtcagatgggctgggagtggtagtgcatacctttaatccaagcactcggtaggcag 51
Query: 359 aggtaggcagatctccaagatggaggccagactcgtttacagagtgagtt 408
|||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 50 aggtaggcagatttccaagatggaggccagcctcgtttacagagtgagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 941
Length adjustment: 10
Effective length of query: 529
Effective length of database: 931
Effective search space: 492499
Effective search space used: 492499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
