Query= MSMg01no084_e21.b1 MSMg01no084_e21.b1 CHROMAT_FILE:
MSMg01no084_e21.b1 PHD_FILE: MSMg01no084_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:18 2005
(420 letters)
>mm_chr2_17265923_17266741
Length = 819
Score = 741 bits (383), Expect = 0.0
Identities = 407/415 (98%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 6 gaattcactgcataactcgaactttatgacctgattatattttaactgtttgtctgtgat 65
||||||||||||||| | |||||||||||||||||||||||||||||||||| || ||||
Sbjct: 619 gaattcactgcataa-ttgaactttatgacctgattatattttaactgtttgcctatgat 561
Query: 66 aatctgtttgtggcttgtgttgcgctgataatctaaattatcattgcattgtatggggta 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatctgtttgtggcttgtgttgcgctgataatctaaattatcattgcattgtatggggta 501
Query: 126 ataaaacatgatgatagagcttcagttaagcaggaagctatgtaaacctttaaagatgct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataaaacatgatgatagagcttcagttaagcaggaagctatgtaaacctttaaagatgct 441
Query: 186 aaaaatgaaagtctttctgaagtattccatgctccttaggacccttctccaggcaagtag 245
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaaatgaaggtctttctgaagtattccatgctccttaggacccttctccaggcaagtag 381
Query: 246 ctgtctataactgatgaccaaaaaagtcaagctgtgtgaaacttctgtgatcatcattcc 305
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgtcaataactgatgaccaaaaaagtcaagctgtgtgaaacttctgtgatcatcattcc 321
Query: 306 aggatgtgtaagaccactagaatccttatgcctggaaacttctctgatcaaatgtccttc 365
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 320 aggatgtgtaagaccactagaatccttatgcctggaaacttctctgagcaaacgtccttc 261
Query: 366 ccaattatctgtaacttcagtgtatctacaagagcttgccatgcttattgtgtct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccaattatctgtaacttcagtgtatctacaagagcttgccatgcttattgtgtct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_e21.g1 MSMg01no084_e21.g1 CHROMAT_FILE:
MSMg01no084_e21.g1 PHD_FILE: MSMg01no084_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:18 2005
(248 letters)
>mm_chr2_17108900_17109547
Length = 648
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%)
Strand = Plus / Plus
Query: 1 actatccagggaaactggaattttcccaggtcaccagcttgtcctttgttccttggatac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 actatccagggaaactggaattttcccaggtcaccagcttgccctttgttccttggatac 260
Query: 61 cattgaacatagaccccatgttcatagtttcctttccaaataaagctcatttatccaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattgaacatagaccccatgttcatagtttcctttccaaataaagctcatttatccaaac 320
Query: 121 cttctacaatcataaaactaccctgtctacctgatttcaattacaataaaaaatgctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctacaatcataaaactaccctgtctacctgatttcaattacaataaaaaatgctgag 380
Query: 181 acactcaacttttaaacttttaaacagaagtggttcactttggaagttccagtccattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactcaacttttaaacttttaaacagaagtggttcactttggaagttccagtccattac 440
Query: 241 taatgctt 248
||||||||
Sbjct: 441 taatgctt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
