Query= MSMg01no084_k10.b1 MSMg01no084_k10.b1 CHROMAT_FILE:
MSMg01no084_k10.b1 PHD_FILE: MSMg01no084_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:44 2005
(531 letters)
>mm_chr2_80164019_80164949
Length = 931
Score = 996 bits (515), Expect = 0.0
Identities = 524/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 5 gaattctttactttgcatttttaagtaacttgcttttcaaaggtaaagatcttacttagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttactttgcatttttaagtaacttgcttttcaaaggtaaagatcttacttagg 264
Query: 65 aaaagggtttaatttaatcactgtaatctttactctgttgtacaggtccctagcacacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaagggtttaatttaatcactgtaatctttactctgttgtacaggtccctagcacacac 324
Query: 125 cattgatctcagtacttggagccagaggcaggaggatacctgtgttttaaaggcaggctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattgatctcagtacttggagccagaggcaggaggatacctgtgttttaaaggcaggctt 384
Query: 185 ggtattcatagcaaattccaggctaccagggctatacagtgagacctgcctcaaagatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtattcatagcaaattccaggctaccagggctatacagtgagacctgcctcaaagatca 444
Query: 245 agctcagcgtctgtgagaggccctggcttcctgagcctcgctgtcaggggtagaagagct 304
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 agctcagcgtctgtgagaggccctggcttcctgagcctcgctgtg-ggggtagaagagct 503
Query: 305 gtaatctcagctctggtgctcctctttatctcctatgtgcacagactggcataagccctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaatctcagctctggtgctcctctttatctcctatgtgcacagactggcataagccctg 563
Query: 365 gctgttagctcctgtgccacacgtatggcttcatggcagtcattcccctacaaggctgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 564 gctgttagctcctgtgccacacgtatggcttcatggcagtcattcccctacaaagctgct 623
Query: 425 actcattcaagtatagatgtaggagaggttgtaaagttacatgggcttgacatttgaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 actcattcaagtatagatgtaggagaggttgtaaagttacatgggcttgacatttgaaaa 683
Query: 485 gaaccacaggaagtaaggcagtgaactatttaggactgatttttttt 531
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaaccacaggaagtaaggcagtgaactatttaggactgatttttttt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_k10.g1 MSMg01no084_k10.g1 CHROMAT_FILE:
MSMg01no084_k10.g1 PHD_FILE: MSMg01no084_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:44 2005
(504 letters)
>mm_chr2_80321745_80322649
Length = 905
Score = 930 bits (481), Expect = 0.0
Identities = 500/507 (98%), Gaps = 3/507 (0%)
Strand = Plus / Minus
Query: 1 aaagacatgaaatgtctattgtgaaaatacataaataattcaaaagctgttctcgaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aaagacatgaaatgtctattgtgaaaatacataaataattcaaaagctgttctcgaaagg 823
Query: 61 cctatccaagtggctatcaatgaagtggtcgctctctactgaatgcacggaagaatagcg 120
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 822 cctatccaagtggctatcaatgaagtggttgctctctactgaatgcatggaagaatagcg 763
Query: 121 ccatattgggttcactgaggcactctctcctgacttttttttttttt--aataatttcca 178
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 762 ccatattgggttcactgaggcactctctcctgacttttttttttttttaaataatttcca 703
Query: 179 tcaacagaccttcaccccgaacaaaagtaggtgcttttcagcataacatctcaagtaact 238
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tcaacagaccttcaccctgaacaaaagtaggtgcttttcagcataacatctcaagtaact 643
Query: 239 ggaggaacaagaggaggaatgaagtaggggtgtgttgctaattggtaactttgccagctc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggaggaacaagaggaggaatgaagtaggggtgtgttgctaattggtaactttgccagctc 583
Query: 299 ctaatcatgaagatggtcatttgtagatgactgaaagctttagtgagaggcatttaccta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctaatcatgaagatggtcatttgtagatgactgaaagctttagtgagaggcatttaccta 523
Query: 359 ccatgcacaaggccttgtatctcccttccattattcccataaagctttcaagtttgagta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ccatgcacaaggccttgtatctcccttccattattcccataaagctttcaagtttgagta 463
Query: 419 ttggtaaagtaagctcacttgcacatttttgtaac-tttttttttgaaatgtgcattggt 477
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 462 ttggtaaagtaagctcacttgcacatttttgtaacttttttttttgaaatgtgcattggt 403
Query: 478 gttttccctgcatgtatgtctgtatga 504
||||||||||||||||||| |||||||
Sbjct: 402 gttttccctgcatgtatgtttgtatga 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
