Query= MSMg01no085_f06.b1 MSMg01no085_f06.b1 CHROMAT_FILE:
MSMg01no085_f06.b1 PHD_FILE: MSMg01no085_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:58 2005
(184 letters)
>mm_chr2_140813799_140814382
Length = 584
Score = 325 bits (168), Expect = 1e-93
Identities = 180/184 (97%)
Strand = Plus / Minus
Query: 1 ataagcactattatccacaaagtaatcttcacaacgatgatttaagtttttaaattttca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 ataagcactattatccacaaagtaatcttcacaaggatgatttaagtttttaaattttca 325
Query: 61 tctcatacccttgattctgaggaaacagaaatatctaattcatgccgcagatatctttta 120
||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 324 tctcatacccttgattctgaggaaacagaaatacctaatttatgccccagatatctttta 265
Query: 121 gtttctttcctaacaattttaggatggagatgggggaaatgatgattataaaagtttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttctttcctaacaattttaggatggagatgggggaaatgatgattataaaagtttata 205
Query: 181 aaat 184
||||
Sbjct: 204 aaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_f06.g1 MSMg01no085_f06.g1 CHROMAT_FILE:
MSMg01no085_f06.g1 PHD_FILE: MSMg01no085_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:58 2005
(400 letters)
>mm_chr2_140683121_140683920
Length = 800
Score = 642 bits (332), Expect = 0.0
Identities = 385/408 (94%), Gaps = 10/408 (2%)
Strand = Plus / Plus
Query: 3 tctctatgcccatttcttgagtggctgcaccagttcacagccttaccaaactgcatgagt 62
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 193 tctctatgcccatttcttgagtggctgcaccagttcacagtcttaccaaactgcatgagt 252
Query: 63 tctcttttccctcacacccttgccagcatttgttgtcagttgtttttcagatagcagcga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tctcttttccctcacacccttgccagcatttgttgtcagttgtttttcagatagcagcga 312
Query: 123 tttgaac------ag----tgtgaaaagatattgtgccttttgggttttgactccttgat 172
||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 313 tttgaactataaaagatattgtgaaaagatattgtgccttttgggttttgactctttgat 372
Query: 173 tttgaggttctttctatattttgagtattaattctctgttagatgaatatatctggcaat 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttgaggttctttctatattttgagtattaattctctgttagatgaatatatctggcaat 432
Query: 233 gattgtctccaaatttgtgggcttcctttcctcttgattgttttcttgtcctacagaagg 292
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 433 gattgtctccaaattggtgggcttcctttcctcttgattgttttcttgtcctacagaatg 492
Query: 293 aggtcccatttgctccttgagagccttaactcttgagcttttgaagtcttatgcaggccg 352
||||||| |||| |||||| ||||||||| |||||||| |||||||||||||||| |
Sbjct: 493 aggtcccgtttgttccttgtgagccttaattcttgagcacatgaagtcttatgcaggaag 552
Query: 353 tccttcccctcacgtaggttctcttccagccattttaatgttcagggt 400
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tccttcccctcacgtaggttctcttccagccattttaatgttcagggt 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
