Query= MSMg01no088_f13.b1 MSMg01no088_f13.b1 CHROMAT_FILE:
MSMg01no088_f13.b1 PHD_FILE: MSMg01no088_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:47 2005
(563 letters)
>mm_chr2_57692645_57693606
Length = 962
Score = 1004 bits (519), Expect = 0.0
Identities = 549/559 (98%), Gaps = 1/559 (0%)
Strand = Plus / Minus
Query: 5 gaattccttattgatggtcaaccattgcttttgtaatccccaacgtttgactctttgtga 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 762 gaattccttattgatggtcaaccattgcttttgtaatccccaatgtttgactctttgtga 703
Query: 65 agaaagtgtattttccaagagaggggttaagaaagaaaacatgtttctgtttagagcgag 124
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 702 agaaagtg-attttgcaagagaggggttaagaaagaaaacatgtttctgtttagagagag 644
Query: 125 tctaggacaataggtgggagagctacaaggataaccacacaacccgcctattagcatggc 184
||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 643 tctgggacaataggtgggagagctacgacgataaccacacaacccgcctattagcatggc 584
Query: 185 acaaatagaaactttctgttaaagctcaagaatataaatggaagtaaatggcagcattat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 acaaatagaaactttctgttaaagctcaagaatataaatggaagtaaatggcagcattat 524
Query: 245 tgcatgaataaatgagttagtcaatcaatcactgacaaggcacactctgtaatcaaaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgcatgaataaatgagttagtcaatcaatcactgacaaggcacactctgtaatcaaaaga 464
Query: 305 tttttcatgttaagattaatttcatgtaataccattctaaatattacataagccactttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttttcatgttaagattaatttcatgtaataccattctaaatattacataagccactttg 404
Query: 365 acattgaaccatacttcataagacagagagagcactttcagaggccagagagtggtagat 424
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 403 acattgaattatacttcataagacagaaagagcactttcagaggccagagagtggtagat 344
Query: 425 agggacaattctgttagacttcctggtctgcgtggccacaggcacaggtctgaggatact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agggacaattctgttagacttcctggtctgcgtggccacaggcacaggtctgaggatact 284
Query: 485 ttggaagtcattgtctaaaactgtaacaactagcaataggtgttatttaaataatcatac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttggaagtcattgtctaaaactgtaacaactagcaataggtgttatttaaataatcatac 224
Query: 545 tagtgaacagcattggtaa 563
|||||||||||||||||||
Sbjct: 223 tagtgaacagcattggtaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 962
Length adjustment: 10
Effective length of query: 553
Effective length of database: 952
Effective search space: 526456
Effective search space used: 526456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_f13.g1 MSMg01no088_f13.g1 CHROMAT_FILE:
MSMg01no088_f13.g1 PHD_FILE: MSMg01no088_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:47 2005
(225 letters)
>mm_chr2_57561373_57561997
Length = 625
Score = 395 bits (204), Expect = e-114
Identities = 219/224 (97%)
Strand = Plus / Plus
Query: 1 tttgcttcacagatcacaggagaatcatacgctttcctgagtctgattaaagacaattgc 60
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 201 tttgcttcacagatcacaggagaatcgtacactttcctgagtctgattaaagacaattgc 260
Query: 61 aaatactctccaaatgaacagaaggaaggaaaagttcctggaatttcatggaaaaaaatg 120
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 aaatacgctccaaatgaacagaaggaaggaaaagttcctgggatttcatggaaaaaaatg 320
Query: 121 agtggagaaatatgaaattgtatattaggtaaatacaggttcgcaaatggacttggtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 agtggagaaatatgaaattgtatattaggtaaatacaggttcgcaaatggacttggttga 380
Query: 181 taggaaaatttgttatgaataatctatcccacgatcatttgccc 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggaaaatttgttatgaataatctatcccacgatcatttgccc 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
