Query= MSMg01no089_h05.b1 MSMg01no089_h05.b1 CHROMAT_FILE:
MSMg01no089_h05.b1 PHD_FILE: MSMg01no089_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:15 2005
(315 letters)
>mm_chr2_117600526_117601240
Length = 715
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%)
Strand = Plus / Minus
Query: 5 gaattctgtgggatggctctcagtttcctatgcactctagaggttaaaaatatttattta 64
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 512 gaattctgtgggatggctctcagttccctatgcactctagaagttaaaaatatttattta 453
Query: 65 gcatatatcatgattttttaagagaaattacttgtgaatggaatagaaccattatcacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 452 gcatatatcatgattttttaagagaaattacttgtgaatggaatagaaccattgtcacat 393
Query: 125 gtcttctcagaaacctggaacaaatgctcccccaagaattaacttcattcatatgtaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtcttctcagaaacctggaacaaatgctcccccaagaattaacttcattcatatgtaaag 333
Query: 185 gtcaaggggaaatcaacatagaattcataaatacttgaaaatgggagattggctgaaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtcaaggggaaatcaacatagaattcataaatacttgaaaatgggagattggctgaaaag 273
Query: 245 gaataagaaaagacaatttttagtgaattataacacattgaaaacaaaatttatgttaaa 304
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 272 gaataagaaaagacaatttttagtgaattagaacacattgaaaacacaatttatgttaaa 213
Query: 305 tagatgaa 312
||||||||
Sbjct: 212 tagatgaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_h05.g1 MSMg01no089_h05.g1 CHROMAT_FILE:
MSMg01no089_h05.g1 PHD_FILE: MSMg01no089_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:15 2005
(239 letters)
>mm_chr2_117473053_117473687
Length = 635
Score = 412 bits (213), Expect = e-119
Identities = 231/239 (96%), Gaps = 4/239 (1%)
Strand = Plus / Plus
Query: 1 gtgagctatcacttgattggcaacatgatagtgctcagaagtctctttgggatcttttag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 gtgagctatcacttgattggcaacatgatagtgctcagaagtctctctgggatcttttag 260
Query: 61 tggttgtagaaacattgtaagtttgttcactatatataacgggtaaaaccagttcaaatg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgattgtagaaacattgtaagtttgttcactatatataacgggtaaaaccagttcaaatg 320
Query: 121 ttagtcagttaataaataaacagacacacaaaatgaggttcatccatatagagggatatt 180
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatcagttaataaa----cagacacacaaaatgaggttcatccatatagagggatatt 376
Query: 181 gttaaactacaataaagaacagtcccatgaaggaataaaactgatctactgggagtgtg 239
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gttgaactacaataaagaacagtcccatgaaggaataaaactgatctactgggagtgtg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 635
Length adjustment: 9
Effective length of query: 230
Effective length of database: 626
Effective search space: 143980
Effective search space used: 143980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
