Query= MSMg01no089_i13.b1 MSMg01no089_i13.b1 CHROMAT_FILE:
MSMg01no089_i13.b1 PHD_FILE: MSMg01no089_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:22 2005
(399 letters)
>mm_chr2_123485768_123486566
Length = 799
Score = 743 bits (384), Expect = 0.0
Identities = 393/396 (99%), Gaps = 2/396 (0%)
Strand = Plus / Plus
Query: 5 gaattccatgtttatattcttg-attgttctcatttaggtcagctgattgtttctgtttc 63
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgtttatatt-ttgcattgttctcatttaggtcagctgattgtttctgtttc 263
Query: 64 tatggagtccattcaacctagtgtgtgtcctgttttctttctctgagcatctttatattt 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatggagtccattcaatctagtgtgtgtcctgttttctttctctgagcatctttatattt 323
Query: 124 ttctttgaattccttagggtaaaatctaaaccacacccaacagcggtcatttttgtataa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctttgaattccttagggtaaaatctaaaccacacccaacagcggtcatttttgtataa 383
Query: 184 taatcagttttcccatggggcatagtaccttctttttctggttttgcactgatattgctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatcagttttcccatggggcatagtaccttctttttctggttttgcactgatattgctt 443
Query: 244 ctctgggattaggccattggtcagattgttttttacttaccaatatttttcctgctaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctctgggattaggccattggtcagattgttttttacttaccaatatttttcctgctaaaa 503
Query: 304 tgtttgctatattcaagagacacttcagaattcaatctaaaggtttctcaaatatctaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtttgctatattcaagagacacttcagaattcaatctaaaggtttctcaaatatctaaa 563
Query: 364 actaaaagtgtgactcagctatggtactcttgacac 399
||||||||||||||||||||||||||||||||||||
Sbjct: 564 actaaaagtgtgactcagctatggtactcttgacac 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_i13.g1 MSMg01no089_i13.g1 CHROMAT_FILE:
MSMg01no089_i13.g1 PHD_FILE: MSMg01no089_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:22 2005
(232 letters)
>mm_chr2_123560379_123561010
Length = 632
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 tgattattaatgtagtagttaagaatttactttgaaatgaggaagctaaaaatacattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgattattaatgtagtagttaagaatttactttgaaatgaggaagctaaaaatacattga 373
Query: 61 atgaagttgggtggggaactttaaagaatccttcacttctctatgtgaaccagggtactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atgaagttgggtggggaactttaaagaatccttcacttctctatgtgaaccagggtactt 313
Query: 121 agcagtgtaaggttcacgataaatgagtcatggcattgacagtgacacagacgttgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agcagtgtaaggttcacgataaatgagtcatggcattgacagtgacacagacgttgtatg 253
Query: 181 ttttgttttataaaacacttaagccgtgcgtggtaatgcacgcctttaattc 232
|||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttgttttagaaaacacttaagccgtgcgtggtaatgcacgcctttaattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
