Query= MSMg01no090_l10.b1 MSMg01no090_l10.b1 CHROMAT_FILE:
MSMg01no090_l10.b1 PHD_FILE: MSMg01no090_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:57 2005
(458 letters)
>mm_chr2_3184713_3185570
Length = 858
Score = 770 bits (398), Expect = 0.0
Identities = 440/454 (96%)
Strand = Plus / Minus
Query: 5 gaattcttggctcttgcgtagacagcaggagtctgtgatggcaagttgtaggagagagaa 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaattcttggctcctgggtagacagcaggagtctgtgatggcaagttgtaggagagagaa 599
Query: 65 ggaactgaaaggccctttgcataattggcagggaaaggatccataaatggagctggaatg 124
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ggaactgaaaggtcgtttgcataattggcagggaaaggatccataaatggagctggaatg 539
Query: 125 tgatatattcagagataatctgatagagctttttataatcaaatgtgaataagttgagcc 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgatatattcagggataatctgatagagctttttataatcaaatgtgaataagttgagcc 479
Query: 185 cattacagaaacattcaccaagttatcttgtcaaagatgcaggtgtgagaagtgcatctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cattacagaaacattcaccaagttatcttgtcaaagatgcaggtgtgagaagtgcatctt 419
Query: 245 aaactgttttggaccatttggacaaaggcaaggctagaggcaaagttggagttaatgtgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaactgttttggaccatttggacaaaggcaaggctagaggcaaagttggagttaatgtgt 359
Query: 305 tctgtgtcaaatgatttatgaccccacctgctgtacatggggctctgggcagaagggttg 364
|||||||||||||| ||||||| | ||| ||| | |||||||||||||||||||||||
Sbjct: 358 tctgtgtcaaatgaaaaatgaccctaactgttgttcgtggggctctgggcagaagggttg 299
Query: 365 ggagagtgcaccgaatggaagttgctaccattccaggcaggaagggaagattgttcacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggagagtgcaccgaatggaagttgctaccattccaggcaggaagggaagattgttcacag 239
Query: 425 tgcccagccccagggtggttaatgatggctgaat 458
||||||||||||| ||||||||||||||||||||
Sbjct: 238 tgcccagccccagagtggttaatgatggctgaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_l10.g1 MSMg01no090_l10.g1 CHROMAT_FILE:
MSMg01no090_l10.g1 PHD_FILE: MSMg01no090_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:58 2005
(285 letters)
>mm_chr2_3051367_3052051
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 aagagggaaccaagtggtgttaataagagcatgccagggtggcatgtggaaattgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aagagggaaccaagtggtgttaataagagcatgccagggtggcatgtgggaattgggagt 260
Query: 61 ggggaatggagaacctggagggcagcatggggttcacaggtcaagaattagtcatgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaatggagaacctggagggcagcatggggttcacaggtcaagaattagtcatgcaga 320
Query: 121 aaagagacaaagataccctttccatgggccactgtatcatttgtgtgatgtacatttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagacaaagataccctttccatgggccactgtatcatttgtgtgatgtacatttgaa 380
Query: 181 tggagcaggaaggtcccgacatcctgatagcctccatagccaagatggctacatttatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggagcaggaaggtcccgacatcctgatagcctccatagccaagatggctacatttatac 440
Query: 241 gtctgtgaagtattaccaaaaataaaaatagctttgagctggggg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctgtgaagtattaccaaaaataaaaatagctttgagctggggg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
