Query= MSMg01no091_b21.b1 MSMg01no091_b21.b1 CHROMAT_FILE:
MSMg01no091_b21.b1 PHD_FILE: MSMg01no091_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:30 2005
(494 letters)
>mm_chr2_127069035_127069928
Length = 894
Score = 878 bits (454), Expect = 0.0
Identities = 484/494 (97%)
Strand = Plus / Plus
Query: 1 gctcttaactgctgagttatctttctaatctcccttaacctccttttaatactaacaagt 60
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctcttaaccactgagcaatctttctaatctcccttaacctccttttaatactaacaagt 260
Query: 61 tttctcataacttaatcctctttttaaagtcaagaactttaagcactaacaattccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctcataacttaatcctctttttaaagtcaagaactttaagcactaacaattccccca 320
Query: 121 ttgcctatcactgtataaaacttttgtacctgaaatgttcatttcatcttagtaaattat 180
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcccatcactgtataaaacttttgaacctgaaatgttcatttcatcttagtaaattat 380
Query: 181 aaaagcagcaaaaaatccaattgtctagcaatgaatgtttgagtttgttttttaaggaag 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagcagcaaaaaatccatttgtctagcaatgaatgtttgagtttgttttttaaggaag 440
Query: 241 atttttgttatgtaaggtttgtttgtattttttatgcataggtgtttttgcctacatgta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 atttttgttatgtaaggtttgtttgtattttttatgcataggtgtttttgcctagatgta 500
Query: 301 tttctgtgtaccatgtatatatagtgctcactgaggctaaaaggctgtcacatcccttga 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tttctgtgtaccatgtatatatagtgctcactgaggctaaaaggttgtcacatcccttga 560
Query: 361 aaccagagttacagatgactgctaggtgccatgtgggtgctgggaatagaacccaggtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccagagttacagatgactgctaggtgccatgtgggtgctgggaatagaacccaggtcc 620
Query: 421 tctggaagagcagacagtgctcttaactgctaaggcatatatctccagcttcaagtaagt 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctggaagagtagacagtgctcttaactgctaaggcatatatctccagcttcaagtaagt 680
Query: 481 ttaattttaaatac 494
||||||||||||||
Sbjct: 681 ttaattttaaatac 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_b21.g1 MSMg01no091_b21.g1 CHROMAT_FILE:
MSMg01no091_b21.g1 PHD_FILE: MSMg01no091_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:31 2005
(480 letters)
>mm_chr2_127163857_127164737
Length = 881
Score = 872 bits (451), Expect = 0.0
Identities = 474/483 (98%), Gaps = 3/483 (0%)
Strand = Plus / Minus
Query: 1 aaccatgttccagtgaatatatggacaaaacaaaatggacttaccttttccttttggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 aaccatgttccagtgaatatatggacaaaacaaaatggacttaccttttccttttggggg 750
Query: 61 ggcagaacatcctggggaggggagggagcagatgtgggaaaactgggaggtgagcacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggcagaacatcctggggaggggagggagcagatgtgggaaaactgggaggtgagcacaat 690
Query: 121 cagggtgcttgatgtgagatttccaaataattcattaaaaaaaaaa---tgatacaattc 177
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 689 cagggtgcttgatgtgagatttccaaataattcattaaaaaaaaaaaactgatacaattc 630
Query: 178 ctgaggaaggctcagaacaaccctagctcttgagtgctttacccagagcagagaaaatgg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ctgaggaaggctcagaacaaccctagctcttgagtgctttacccagagcagagaaaatgg 570
Query: 238 gcgccaggggtaggttatgcacccttcatccagggagccagtgccctctgatctaaatgc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcgccaggggtaggttatgcacccttcatccagggagccagtgccctctgatctaaatgc 510
Query: 298 cctcagtcaacacatacctgcacaccacacactgggtaaatgtggggtctgatcagggat 357
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 509 cctcagtcaacacatacctgcacaccacacactaggtaaatgtggggtctgatcagggat 450
Query: 358 gcacagagctgctgtgaggctgaggtcgacctcggccttcctaaccctcccagttcaacc 417
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 449 gcacagagccgctgtgaggctgaggccgacctcggccttcctaaccctcccagttcaacc 390
Query: 418 acaggctagaacctgtatgggaaagagcccaggacaggccagcccaggtcagcccaggcc 477
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 389 acaggctagaacctgtatgggaaagagcccagcccaggccagcccaggccagcccaggcc 330
Query: 478 agc 480
|||
Sbjct: 329 agc 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space: 409370
Effective search space used: 409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
