Query= MSMg01no091_h22.b1 MSMg01no091_h22.b1 CHROMAT_FILE:
MSMg01no091_h22.b1 PHD_FILE: MSMg01no091_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:02 2005
(385 letters)
>mm_chr2_135542736_135543520
Length = 785
Score = 663 bits (343), Expect = 0.0
Identities = 373/385 (96%), Gaps = 4/385 (1%)
Strand = Plus / Plus
Query: 5 gaattctcg----tttttttttttctttaaatctttcagctcaaggcagccggttaggga 60
||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 201 gaattctcgttttttttttttttttttttaatctttcagctcaaggcagccggttaggga 260
Query: 61 gttctgcctccagacctctaagaacccagagcatgtttgcagatgccatcactgttggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctgcctccagacctctaagaacccagagcatgtttgcagatgccatcactgttggga 320
Query: 121 gcgagctggtcagactccgacctgccagtcagctcttttagtggtctgcttaacaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgagctggtcagactccgacctgccagtcagctcttttagtggtctgcttaacaggctg 380
Query: 181 gtccggctggcatcggtgtgattatccagccctagaggtagagttctgggcgctgcccca 240
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 381 gtccggctggcatcggtgtgattatccagccctagaggcagagctctgggcgctgcccca 440
Query: 241 agaaagacaacctcatcttgtatccagctacatgtccaaggagggaagctgacggagcac 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 agaaagacaacctcatcttgtatccagctacatgtccaaggaaggaagctgacggagcac 500
Query: 301 agggctttcccgggtgcctcccctgggcggcttgccttattgctggatgaggttgcagca 360
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 501 agggctttcccgggtgcctcccctggccggcttgccttattgctggatgaggctgcagca 560
Query: 361 agcccatgaaaaggaggccttggga 385
||||||||||||||||| |||||||
Sbjct: 561 agcccatgaaaaggagggcttggga 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_h22.g1 MSMg01no091_h22.g1 CHROMAT_FILE:
MSMg01no091_h22.g1 PHD_FILE: MSMg01no091_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:02 2005
(194 letters)
>mm_chr2_135651417_135652010
Length = 594
Score = 375 bits (194), Expect = e-109
Identities = 194/194 (100%)
Strand = Plus / Minus
Query: 1 tataattaattagtcagagaagtgatcagccatgcaaaagaagagaaagtgtcaacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tataattaattagtcagagaagtgatcagccatgcaaaagaagagaaagtgtcaacagca 335
Query: 61 gacaagaatagaagtcagagacagaaaatcaggggtgatacatgctacagagcagtatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gacaagaatagaagtcagagacagaaaatcaggggtgatacatgctacagagcagtatca 275
Query: 121 caaagcaagaaacacagtagaccagaaactggctgcagtaggtggccctggctgcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 caaagcaagaaacacagtagaccagaaactggctgcagtaggtggccctggctgcagctg 215
Query: 181 gcaatataacaaga 194
||||||||||||||
Sbjct: 214 gcaatataacaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
