Query= MSMg01no093_a13.b1 MSMg01no093_a13.b1 CHROMAT_FILE:
MSMg01no093_a13.b1 PHD_FILE: MSMg01no093_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:07 2005
(373 letters)
>mm_chr2_18722352_18723124
Length = 773
Score = 636 bits (329), Expect = 0.0
Identities = 361/377 (95%), Gaps = 10/377 (2%)
Strand = Plus / Minus
Query: 1 atctgacaaacccctataggctactggggacttccttt-----aaagagatggacgcaga 55
||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 572 atctgacaaacccctataggctactggggac-----ttagggaaaagagatggaggcaga 518
Query: 56 atcctttggtagtagggagtaccaggttcagggaaagggagcagaagactgccccgaacc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atcctttggtagtagggagtaccaggttcagggaaagggagcagaagactgccccgaacc 458
Query: 116 taggcatccagtgtaaggagaggcgtcattgctctaaggatgattttaaaccgcgcagag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taggcatccagtgtaaggagaggcgtcattgctctaaggatgattttaaaccgcgcagag 398
Query: 176 gcgcagcatatggtttccaggtttggcggcacaacacagaagactttgagccgaaggggc 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acgcagcatatggtttccaggtttggcggcacaacacagaagactttgagccgaaggggc 338
Query: 236 ctccagacacggaaactaaataatcccgatttagagaggcccgagtagcaggaggctgga 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctccagacacggaaactaaataatcccgatttagagaggcccgagtagcaggaggctgga 278
Query: 296 tttttggttaagctacaattaagagaacatttttatgcccggagccgtgcagcttattaa 355
||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 277 tttttggttaagctacaattaagagaagataattaagcccggagccgtgcagcttattaa 218
Query: 356 tatttatagctctcgga 372
|||||||||||||||||
Sbjct: 217 tatttatagctctcgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no093_a13.g1 MSMg01no093_a13.g1 CHROMAT_FILE:
MSMg01no093_a13.g1 PHD_FILE: MSMg01no093_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:07 2005
(551 letters)
>mm_chr2_18590198_18591148
Length = 951
Score = 1035 bits (535), Expect = 0.0
Identities = 547/551 (99%)
Strand = Plus / Plus
Query: 1 agatgtttcctttaaaagaaaaagaaaaacaacttctcagcagcatgataatttggccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 agatgtttcctttaaaagaaaaagaaaaacaacttctcagcagcatgataatttggcctt 260
Query: 61 tttgaatcttggatctaaactatttaattttcctctttgttcaattatgaagtttttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgaatcttggatctaaactatttaattttcctctttgttcaattatgaagtttttata 320
Query: 121 ctttatatgtattcatttaaaaggagaaaatggtatgaaatgtcaaaagatctatttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttatatgtattcatttaaaaggagaaaatggtatgaaatgtcaaaagatctatttaaa 380
Query: 181 tgaaaatggatccactgagtattaatttcaatatctcaaattaaatttcaaggagaaaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tgaaaatggatccactgagtattaatttcaatatctcaaattaaatttcaagaagaaaac 440
Query: 241 ccaaagtgcttatgcagaacataaagatgactttcctgatgtttcagaggatattttatg 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ccaaagtgcttatgcagaacataaagatgactttcctgaggtttcagaggatattttatg 500
Query: 301 acggctttcacgtcctggtctctgtgggttctcaggtctcacttgccctcccatcccaac 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 acggctttcacgtcctggtctctgtgggctctcaggtctcacttgccctcccatcccaac 560
Query: 361 cctgactccacagaaatgaatttgcatttggttctcaaattcacacatacagactaagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgactccacagaaatgaatttgcatttggttctcaaattcacacatacagactaagct 620
Query: 421 agactacactgagaaaattgttatatacatctaaagaattattgtagcagtgaacatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agactacactgagaaaattgttatatacatctaaagaattattgtagcagtgaacatttt 680
Query: 481 agaagttgagacttccttttatatttaactcagaaaaaaacaaaaacaaaaacaaagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaagttgagacttccttttatatttaactcagaaaaaaacaaaaacaaaaacaaagctt 740
Query: 541 tactgtctcct 551
|||||||||||
Sbjct: 741 tactgtctcct 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
