Query= MSMg01no094_g12.b1 MSMg01no094_g12.b1 CHROMAT_FILE:
MSMg01no094_g12.b1 PHD_FILE: MSMg01no094_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:02 2005
(316 letters)
>mm_chr2_75789875_75790591
Length = 717
Score = 567 bits (293), Expect = e-166
Identities = 308/315 (97%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 5 gaattcctggtaaacccc---atctaattggctacatttacatcaagctacccaggcaaa 61
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcctggtaaa--cctaaatctaattggctacatttacatcaagctacccaggcaaa 460
Query: 62 actgaccacattggtttccttgattgattggcaggaacacactgactttacagagaatgg 121
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 actgaccacattggtttggttgattgattggcaggaacacactgactttacagagaatgg 400
Query: 122 ggtaggaatgtcttttccaaaggagaagaagagaaatcaaaagagtgggacaactgagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtaggaatgtcttttccaaaggagaagaagagaaatcaaaagagtgggacaactgagca 340
Query: 182 gccaaaaatgacaaatgttcacccctcaaagaaagagcatccttttcattatgaccatct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gccaaaaatgacaaatgttcacccctcaaagaaagagcatccttttcattatgaccatct 280
Query: 242 ttgctctgacttgtcattaatcagattttaccaagaggaagagacatcagagtttactta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttgctctgacttgtcattaatcagattttaccaagaggaagagacatcagagtttactta 220
Query: 302 gtacctacctaaagt 316
|||||||||||||||
Sbjct: 219 gtacctacctaaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_g12.g1 MSMg01no094_g12.g1 CHROMAT_FILE:
MSMg01no094_g12.g1 PHD_FILE: MSMg01no094_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:02 2005
(494 letters)
>mm_chr2_75624292_75625185
Length = 894
Score = 926 bits (479), Expect = 0.0
Identities = 491/495 (99%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1 agccgagagacttactgactagggaaaatcagaatcccggagccatttgccttgtaaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agccgagagacttactgactagggaaaatcagaatcccggagccatttgcattgtaaatg 260
Query: 61 gtgtctcatgattttgaaagggcatcaggaggggcttgaaattctcaagggaaatataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtctcatgattttgaaagggcatcaggaggggcttgaaattctcaagggaaatataga 320
Query: 121 ttggaccaatcccgacttccctaacaatgaagtcataaatgaagaagtgtgcaaactcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggaccaatcccgacttccctaacaatgaagtcataaatgaagaagtgtgcaaactcca 380
Query: 181 tgtgaagacaactataatattactcaagggtagaaaagaatacttaaattgagatatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgaagacaactataatattactcaagggtagaaaagaatacttaaattgagatatacc 440
Query: 241 atgttcttggatacaaaggttcagtgctgtataaatttaaagctattctacaaatatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttcttggatacaaaggttcagtgctgtataaatttaaagctattctacaaatatact 500
Query: 301 cacacatataatgtgatcaaaaattttttt-agaaacttgataaagcttattgaggacaa 359
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 501 cacacatataatgtgatcaaaaattttttttagaaacttgataaagtttattgaggacaa 560
Query: 360 tgaagctggaaaaaataaaggaagaaaattgaactttttgaaggggaagagaatttgaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaagctggaaaaaataaaggaagaaaattgaactttttgaaggggaagagaatttgaac 620
Query: 420 cactggttttttgtttgtctgttttattttaaatcatgaaacagttgaacgtaaatatct 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactggttttttgtttgtttgttttattttaaatcatgaaacagttgaacgtaaatatct 680
Query: 480 ctttataggtctctg 494
|||||||||||||||
Sbjct: 681 ctttataggtctctg 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|