NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNNNNNCCCNNNNN
NNCCCCNTNNNNNCCCCNNTTNCNNNNNTTCCTTTTATTGATTNGTCTTC
GTTTATACCGCCCCCCTTTGTCGGAAGACGGCATCTTGGGCNACCATCTT
CGTNTCTCCACTTGCGCCCTCGGTAACGCTTCCCGTTTATTTGCTTGCTT
ATATTTGCGGAACGGCCTCTTAGTTTCACTGACGTGAGCCCTATACCCCT
TAGACTGCTCCTGCCTATCTTTCGTAATATCCCATACTACACATTTCTTC
ATTATATCCCTTTCTTTTCGTCCTGCCCGTTCCTTATTGATGTCGATCTT
TTTAATCTTTCTTTGCCAATGTCGTTGCTGTGATACAGGGAGTGAGAGAA
GGAGAAAGAAGAAGAGGAGGAGAAACCAGATTATGAAATGACATAAGAGA
GATTATGATCAAAACATGATTCTGTATATGAAAGGTCACAGTATTATGCC
ACATACGATACATGCGAGGCGCGTATTCTGTTCATCCTATTCGATATAAT
AGTATATGCAAATAAGATAGGAGAATATCCAGCGAATTCCTTAGAACGAG
CGTACCGCGATTATTACAAACATAACTAATAATGCTACGAAATTCGGCTG
AGGTAGCAACCTGAGATTATATATATAATATATATAAAACAATATGTATA
TAAATTATGATTATTATCGTTTTTACTTATACGCCCCACTTTGAACTAAT
GTAATATAAGATTAGATTAATTGAATTATAATATATATATCTCTGATTAA
TTAATTATACACATAATCAACTCACTGGTATTATTAATTTTCTCGCTCTA
GATATATCTCGTATATTAACTCATTCCACAATTATAACGAGTATAGCAGT
CTCAAAGCACATCCTTTCGACCTCAACGATAGATAAGACACAATATATAC
GATCGCGATAACAGCTAAGTATTCAATATATAATGGTAATAATAGAATAT
TTACACATNGAGAGACTTATTTGTTGTATTACAACATATGGATGACTAAT
ACCATATTATACTATTATACTTAATTCAGTATACGTGCGGTAATCGGAN

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGTCTAATGCTGAGCTTTAAATTTTT
CATTACTGTAAATAAATCTTTTTAAAGTTTTGATTTTGAATAGTAGTATG
ACTCTTTTATGTCTTAATATTACTTTTAGAAATATTTCAAATGCATTGGA
AATTTTTTTTACTTTTAATATAGGTAGCAATTTGATTTTTTAAACTCTCA
ATAGTTGTTTTAAAATTTTTGACTTTGTGATTTTTTAATAAAATATACAC
AAGAAATTTAAAGTTATATATAGCTTAGCATGCTTTATGTCACACCAAAT
AAAATAAATATCACTAAGTAATTACTATTTTAATTACTAGAGAAATTTAT
CTATATCTTTATGAAACTTACTTTCCCCTTATAAAAAAAATTCTTCATTT
TCTATTTTCTATTGGCTTCCTGTGTCTTGTTTTTAGGGCTCTTTCCCACT
TTGCTGAAGAGCTTCTATTTATGACCCACTCAGAATAAAACAGTTAATTT
AAGCATCCCTGTTGACTTTGTTGTCAGTCTTGCTCGGCAACGCCCAACTC
TTATCTTTTTTTTTTTACTCTCCAGCTATTACTTACAACTAAATATAAAA
TACAAAAATAAAATGCCCCCCTAAGCCCCTACGTTCACCCCTCTGCTCCT
GGA

Query= MSMg01no094_k07.g1 MSMg01no094_k07.g1 CHROMAT_FILE:
MSMg01no094_k07.g1 PHD_FILE: MSMg01no094_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:23 2005
         (566 letters)



>mm_chr2_94033063_94034032
          Length = 970

 Score = 1048 bits (542), Expect = 0.0
 Identities = 559/566 (98%), Gaps = 4/566 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtctaatgctgagctttaaatttttcattactgtaaataaatctttttaaagttttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctgtctaatgctgagctttaaatttttcattactgtaaataaatctttttaaagttttga 707

                                                                       
Query: 61  ttttgaatagtagtatgactcttttatgtcttaatattacttttagaaatatttcaaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttttgaatagtagtatgactcttttatgtcttaatattacttttagaaatatttcaaatg 647

                                                                       
Query: 121 cattggaaa--ttttttttacttttaatataggtagcaatttgattttttaaactctcaa 178
           |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 646 cattggaaattttttttttacttttaatataggtagcaatttgatttttttaactctcaa 587

                                                                       
Query: 179 tagttgttttaaaatttttgactttgtgattttttaataaaatatacacaagaaatttaa 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tagttgttttaaaatttttgactttgtgattttttaataaaatatacacaagaaatttaa 527

                                                                       
Query: 239 agttatatatagcttagcatgctttatgtcacaccaaataaaataaatatcactaagtaa 298
           ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 526 agttatatatagcttagcatgctttatatcataccaaataaaataaatatcactaagtaa 467

                                                                       
Query: 299 ttactattttaattactagagaaatttatctatatctttatgaaacttactttcccctta 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttactattttaattactagagaaatttatctatatctttatgaaacttactttcccctta 407

                                                                       
Query: 359 taaaaaaaattcttcattttctattttctattggcttcctgtgtcttgtttttagggctc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 taaaaaaaattcttcattttctattttctattggcttcctgtgtcttgtttttagggctc 347

                                                                       
Query: 419 tttcccactttgctgaagagcttctatttatgacccactcagaataaaacagttaattta 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttcccactttgctgaagagcttctatttatgacccactcagaataaaacagttaattta 287

                                                                       
Query: 479 agcatccctgttgactttgttgtcagtcttgctcggcaacgcccaactcttatc--tttt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 286 agcatccctgttgactttgttgtcagtcttgctcggcaacgcccaactcttatctttttt 227

                                     
Query: 537 tttttttactctccagctattactta 562
           ||||||||||||||||||||||||||
Sbjct: 226 tttttttactctccagctattactta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 970
Length adjustment: 10
Effective length of query: 556
Effective length of database: 960
Effective search space:   533760
Effective search space used:   533760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)