XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGAC
TATACTCCAGAGATCATTTCTTAAGAGGAGCCCTAAGAAAATTGTAGTCC
TAAAAGTGTAGCACATTCTTTAACTATCCTTTGAAAATTGTACTCCCAAA
TGAAATTTCATCATGGTGGGCTGTGGGGATCAGGCATACATTTATGTATT
TAACATTAGCTAAGTATAAAAAGCTAAAAAAGAGGAGGTGTTGTGGTTGT
TTTGCTTAGCCCCCATTCTCTGCTTCAGCCTTTCTCCCAATTTGTTTTGC
TTTGTCAACCTAGAGCAGATTTTTGTAAGCTTAGTAACACTTTAAAAGTT
TTTGCCTTCTCATCTGTGTTGGTTTCTCCTAGAAAGCGTGGAACCCCAGG
ACTGTAACAATACAGACTTTGGAGATAGTTTAAATACCACTGCACCAACT
GTCGTGTGACATATGAATAAGGAACTCTCAGAAAGCAGTTTATGAAAATT
TAAAGCATCAGCATCTGAATCTAGGCATTATGGTTATGCCTGTAACTCTA
GGCCTTGGAGGCTGAGGCAGGAGGATTGCCAGGCTAGCCCGAGTTACATA
GTAAAACATGGCACTTTTTAACAGTTCCCAAATTAAAAATTCAACAACAA
CAAATTACCTTGAGTACCGAGAGGCTAAGCTATATGAAGATCA

CTTTCACNNCNCCCNNNCCCCCCATANTCCTNTTTNCCCCNNNNNNCCGG
GGANNGGGGGGAGGAGGGGCGGAGAGGGNNTGGGGGGANCNGTCCGAAAA
GAGGGGGGGGAAGGGGGGAATTGCCAAAAAAAGGGGGGGGGGGAGGGGGN
NNNNGNGNNNGGGGGGGGGGGGGGGGGGTTGGGGCCGAAAGAGGGGGGGG
GGNNNNGANAAGGGGGAGAGGAGGNGGGGGGGGGGGGGGGGGGGGGGGAG
GGNGNNAGGGGAGAGAGAGGGGGGGAAAGGGGGGGAAAAAAGAAGGGGGG
GAAANNGGGGGGGGAGGAAGGAAANGGAGGGGGAAAGAGAAGGGGGGGGA
GGGGAGAGGGGGANAAGGGAGGAGGGGGAAGAAAAAAGGGAGAGAAGGAA
AAGTGTTGGTGGTTTGAGGGAAGAGAAGGGGGAGGGAGAGAAGAAAGGGT
TTTGAGGTGGGGTCCCCGGAGGCGGGGCGGGCGGGGGGGGGGGTGGGGTG
GGGGGGNNTTNNNTTGNTNGTGGGGAAAAATTNTAATNTTTAAAAAAGGG
GGGGTTTGGTTGGGGGGGGTTTTTTNTTNGTTTTTGGAGAGGGGGGGGGG
GGGAGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGCGGGGG
GGAGGGGGGGGGGGGGGGATGGGGGGAGGCGGGGGGAGAGGAGGGAGGAG
GGGGGGGGGTGCGGGGGGGAGGGGAGGGGGGGGAGGAGAGGGGGGGGGGG
GGGGGGGGGGAGGGGAGGGGGGAGAGGGGGCGGGAGGTAAAGGGCCGGGG
GAGGAGGGGGGGAGGAGAACGGAAAGAGAGGAGGAGGGGGGGAGGGGGGG
GAGGGGAGGGGGGGGGGACGGGAGGGGGGGAGGAGGGGGGAGGGGGGAGG
GGGGGGGGGGGGN

Query= MSMg01no095_h19.b1 MSMg01no095_h19.b1 CHROMAT_FILE:
MSMg01no095_h19.b1 PHD_FILE: MSMg01no095_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:31 2005
         (553 letters)



>mm_chr2_160870827_160871778
          Length = 952

 Score = 1025 bits (530), Expect = 0.0
 Identities = 545/550 (99%), Gaps = 1/550 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctctgactatactccagagatcatttcttaagaggagccctaagaaaattgtag 63
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggaattctctgactacattccagagatcatttcttaagaggagccctaagaaaattgtag 626

                                                                       
Query: 64  tcctaaaagtgtagcacattctttaactatcctttgaaaattgtactcccaaatgaaatt 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcctaaaagtgtagcagattctttaactatcctttgaaaattgtactcccaaatgaaatt 566

                                                                       
Query: 124 tcatcatggtgggctgtggggatcaggcatacatttatgtatttaacattagctaagtat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcatcatggtgggctgtggggatcaggcatacatttatgtatttaacattagctaagtat 506

                                                                       
Query: 184 aaaaagctaaaaaagaggaggtgttgtggttgttttgcttagcccccattctctgcttca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaaagctaaaaaagaggaggtgttgtggttgttttgcttagcccccattctctgcttca 446

                                                                       
Query: 244 gcctttctcccaatttgttttgctttgtcaacctagagcagatttttgtaagcttagtaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctttctcccaatttgttttgctttgtcaacctagagcagatttttgtaagcttagtaa 386

                                                                       
Query: 304 cactttaaaagtttttgccttctcatctgtgttggtttctcctagaaagcgtggaacccc 363
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cactttaaaag-ttttgccttctcatctgtgttggtttctcctagaaagcgtggaacccc 327

                                                                       
Query: 364 aggactgtaacaatacagactttggagatagtttaaataccactgcaccaactgtcgtgt 423
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 326 aggactgtaacaatacagactttggagatagcttaaataccactgcaccaactgtcgtgt 267

                                                                       
Query: 424 gacatatgaataaggaactctcagaaagcagtttatgaaaatttaaagcatcagcatctg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gacatatgaataaggaactctcagaaagcagtttatgaaaatttaaagcatcagcatctg 207

                                                                       
Query: 484 aatctaggcattatggttatgcctgtaactctaggccttggaggctgaggcaggaggatt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aatctaggcattatggttatgcctgtaactctaggccttggaggctgaggcaggaggatt 147

                     
Query: 544 gccaggctag 553
           ||||||||||
Sbjct: 146 gccaggctag 137


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 952
Length adjustment: 10
Effective length of query: 543
Effective length of database: 942
Effective search space:   511506
Effective search space used:   511506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)