CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTCTCTGCATCATTATGCCATCCAGATACTATTTTGCAAAATGTTCT
ATACTCAAACCTCTCTCCTTACCAAGTAACCCAGAAGTGATGCAACCAAC
AAAATAAAGCTATGACCTGTGCTCAGACGATAGATGTGGCGGGGAGGTAA
GTGAGAAAATGGCAGGTTGATTACGTGGAGAGTATGAGGGATAGCCATCA
GAAGGACCAACACCAGCAGAAAGAATGAAACGGGTAAGCCACATACCTGT
ACTCGGCTAGCATGTCATAGCAGGGGTGGTGTCCAAGGCCTTCTGCTATG
TGCAGTCTTGGCAGGGCCCAAGGAGTCCAACTACATTAAAGTAGCAGAAG
TTGAACAGATCAATCAACTGTTCAGAAAACTTTTGTTCTTGTTTTCTTTG
CACTGCTCTCATATTTGCAACAAATACCATTAATTTCTTTATTTAGACAC
AGTTCTCTGTATGCTAAATTAAACATTTAAAATACTAAAACCTATTTCTT
TTTTTCTCCATTGCACTGTTCCTACTTGTGTGAAAGTAGTATTTAATTTT
CTTCCAAATTCCTTAAATATTATGGTGATAATTACTTAAATAGTACAATT
ATCATTCTTGGTTTCTCTTTATTCACAAATGCTCACTTATTAGCAT

GATGAAGTGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGGCTACACAAAATTCCAGTCTGGAGAA
GGGTGGGCATGAAGTCTCATCCATAGCTTAGGAGCTATTGGCAGTTGATA
GTGATTGGGAGAGAGTTAGTTTTCTTTAAAGATGTGTCTCTTGATGGGTG
GACCATCCTACAGTGAAGGTCATATATCCAAGAGTATATCTATTTGATGG
TTAAAAATAAGACACCAAGTTTGGGGATAGGGAAGGGAAATGGATCTGTG
AGGAGTTGGGGAAGGTTGTTTATCCCCCCTCCCCCTCTCCTCTCCCCCCC
TTTTTTTTCCTCTCCGGGTGCCCGTTGCGCTCCCCTTTTTCCGTTTATTG
CCTTTTTGCCCCCCTCCCCAACACCCATTCGGGGCCCACTTCACTCTTAA
TCACCCTCTACTAATTCCACCTGACTGTACACCTGGGTCCCCGTCATAAC
ACCCCCCCCCTTTCCCATTCTTCCCAACTTCTGTGTGTGCCGCGGGTTGA
CCTTCGCCACATCGTTCAAAAACCATACTTGTCGCTTCCACCTACCCTAT
TTATCCCCCTAGGCTTTCTAATAATTACCCCCCCCCCCACCACCCCCCCC
GCCGACTCCGCTCTCCACACCCCAGCGACCTTTGTCTCGTTCCCTATACT
CCTCCCCCGCCCCAAATAACTCCTCCCCACTTTTCG

Query= MSMg01no097_e20.b1 MSMg01no097_e20.b1 CHROMAT_FILE:
MSMg01no097_e20.b1 PHD_FILE: MSMg01no097_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:59 2005
         (601 letters)



>mm_chr2_140264977_140265977
          Length = 1001

 Score = 1108 bits (573), Expect = 0.0
 Identities = 594/601 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatgccatccagatactattttgcaaaatgttctatactcaaacctctctccttaccaa 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 801 ttatgccatccagatactattttgaaaaatgttctatactcaaacctctctccttaccaa 742

                                                                       
Query: 61  gtaacccagaagtgatgcaaccaacaaaataaagctatgacctgtgctcagacgatagat 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 gtaacccagaagtgatgcaaccaacaaaataaagctatgacctgtgctcagaagatagat 682

                                                                       
Query: 121 gtggcggggaggtaagtgagaaaatggcaggttgattacgtggagagtatgagggatagc 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggggcggggaggtaagtgagaaaatggcaggttgattacgtggagagtatgagggatagc 622

                                                                       
Query: 181 catcagaaggaccaacaccagcagaaagaatgaaacgggtaagccacatacctgtactcg 240
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 catcagaaggaccaacactagcagaaagaatgaaacgggtaagccacatacctgtacttg 562

                                                                       
Query: 241 gctagcatgtcatagcaggggtggtgtccaaggccttctgctatgtgcagtcttggcagg 300
           |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 gctagcatgtcagagcaggggtggtgtccaaggccttctgctatgtgcagccttggcagg 502

                                                                       
Query: 301 gcccaaggagtccaactacattaaagtagcagaagttgaacagatcaatcaactgttcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcccaaggagtccaactacattaaagtagcagaagttgaacagatcaatcaactgttcag 442

                                                                       
Query: 361 aaaacttttgttcttgttttctttgcactgctctcatatttgcaacaaataccattaatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacttttgttcttgttttctttgcactgctctcatatttgcaacaaataccattaatt 382

                                                                       
Query: 421 tctttatttagacacagttctctgtatgctaaattaaacatttaaaatactaaaacctat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttatttagacacagttctctgtatgctaaattaaacatttaaaatactaaaacctat 322

                                                                       
Query: 481 ttctttttttctccattgcactgttcctacttgtgtgaaagtagtatttaattttcttcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctttttttctccattgcactgttcctacttgtgtgaaagtagtatttaattttcttcc 262

                                                                       
Query: 541 aaattccttaaatattatggtgataattacttaaatagtacaattatcattcttggtttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattccttaaatattatggtgataattacttaaatagtacaattatcattcttggtttc 202

            
Query: 601 t 601
           |
Sbjct: 201 t 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)