Query= MSMg01no098_e20.b1 MSMg01no098_e20.b1 CHROMAT_FILE:
MSMg01no098_e20.b1 PHD_FILE: MSMg01no098_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:22 2005
(572 letters)
>mm_chr2_74703140_74704111
Length = 972
Score = 804 bits (416), Expect = 0.0
Identities = 428/434 (98%), Gaps = 4/434 (0%)
Strand = Plus / Minus
Query: 8 gaattctttctactgctttataaatcaggagagaaataatttaaactggataaacattgg 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaattctttctagtgctttataaatcaggagagaaataatttaaactggataaacattgg 371
Query: 68 ataaacattacgctatattgttgcttgattttgacttagaaaagatctttattagtgtaa 127
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataaacattaggctatattgttgcttgattttgacttagaaaagatctttattagtgtaa 311
Query: 128 atacaggtgatctgagattttggaaaaaaaaaactgtttcatgccaagactaattaatag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atacaggtgatctgagattttggaaaaaaaaaactgtttcatgccaagactaattaatag 251
Query: 188 gtattacaaagtatgaggcttaagatttttattatttgacatggtgtgtgtgtgtgtgtg 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtattacaaagtatgaggcttaagatttttattatttgacatggtgtgtgtgtgtgt--- 194
Query: 248 tatgtgtatgtgttgtgatgtaaacgtcccttttatttccttctatgataggataagatg 307
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 -atgtgtatgtgttgtgatgtaaacgtcccttttatttccttctatgataggataagatg 135
Query: 308 cgagccgtacccaagctaaatgaatacatggcttgggctgaacccagagtgttgttttta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cgagccgtacccaagctaaatgaatacatggcttgggctgaacccagagtgttgttttta 75
Query: 368 aggtaactatccccaggcctactaggcctggaagcttctagcctctgtacaatctaatct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aggtaactatccccaggcctactaggcctggaagcttctagcctctgtacaatctaatct 15
Query: 428 tctgcaagcctgga 441
||||||||||||||
Sbjct: 14 tctgcaagcctgga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_e20.g1 MSMg01no098_e20.g1 CHROMAT_FILE:
MSMg01no098_e20.g1 PHD_FILE: MSMg01no098_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:22 2005
(202 letters)
>mm_chr2_74622404_74623010
Length = 607
Score = 342 bits (177), Expect = 7e-99
Identities = 195/203 (96%), Gaps = 5/203 (2%)
Strand = Plus / Plus
Query: 1 tttctaac-caaattctaagtttgctttttgctagaaagaccatctagtgtgagaaacaa 59
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tttctaacacaaattctaagtttgctttttgctagaaagaccatcttgtgtgagaaacaa 260
Query: 60 aa----cacattctgagttctcaaagccttaatatatatgtatactgttttaaagatagg 115
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 aaggaacacattctgagttctcaaagccttaatatatatgtatactgttttaaagatatg 320
Query: 116 tttctgggtttgttgctatggtttagaaacagggttccatgtagctgggtttgggggtgg 175
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tttctgggtttgttgctatggtttagaaacagggttccatgtagctggggttgggggtgg 380
Query: 176 tgtgggtggtatgcagtggtgtg 198
|||||||||||||||||||||||
Sbjct: 381 tgtgggtggtatgcagtggtgtg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 607
Length adjustment: 8
Effective length of query: 194
Effective length of database: 599
Effective search space: 116206
Effective search space used: 116206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
