Query= MSMg01no098_h07.b1 MSMg01no098_h07.b1 CHROMAT_FILE:
MSMg01no098_h07.b1 PHD_FILE: MSMg01no098_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:34 2005
(547 letters)
>mm_chr2_117542496_117543442
Length = 947
Score = 920 bits (476), Expect = 0.0
Identities = 488/494 (98%), Gaps = 5/494 (1%)
Strand = Plus / Minus
Query: 5 gaattcagattggcctgcttctaaggtcatgaacaaaagctgaaccaatgacccaaaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaattcagattggcctgcttctaaggtcatgaacaaaagctgaaccaatgacccaaaatt 435
Query: 65 tgatgcttttagtctgaatgtccagactgtgaaaggctacattctgtgctctctgtttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgatgcttttagtctgaatgtccagactgtgaaaggctacattctgtgctctctgtttct 375
Query: 125 cccagccctcccattccatttattcccacaacactccatcctctgagttgtaagacaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cccagccctcccattccatttattcccacaacactccatcctctgagttgtaagacaaac 315
Query: 185 ctccctttccggctccttggggtacccaggtaaacacagtttcctctgggactattaagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctccctttccggctccttggggtacccaggtaaacacagtttcctctgggactattaagc 255
Query: 245 agaattcctcttctaagtgtcttattagcttctccagggcaactgaacccatttt----t 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 254 agaattcctcttctaagtgtcttattagcttctccagggcaactgaacccattttattat 195
Query: 301 t-ttattattattatttagcttgaaaaaatcattcccagtttcatgctgagaggacaact 359
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 194 tattattattattatttagcttgaaaaaatcattcccagtttcatggtgagaggacaact 135
Query: 360 ccagcctttaagtttttaaagtgatcatattgaggtggatgagttgggccaaggaggact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccagcctttaagtttttaaagtgatcatattgaggtggatgagttgggccaaggaggact 75
Query: 420 ttccagaagaattaacagcaaggaaagtgttttctctcttgaggaaggattgctggctca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ttccagaagaattaacagcaaggaaagtgttttctctcttgaggaaggattgctggctca 15
Query: 480 gaagatgtaagaaa 493
||||||||||||||
Sbjct: 14 gaagatgtaagaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_h07.g1 MSMg01no098_h07.g1 CHROMAT_FILE:
MSMg01no098_h07.g1 PHD_FILE: MSMg01no098_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:35 2005
(475 letters)
>mm_chr2_117388584_117389458
Length = 875
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%)
Strand = Plus / Plus
Query: 1 atgtcttcatgcttgagaagcaagcattttacccactgagccatctcctgaattcctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtcttcatgcttgagaagcaagcattttacccactgagccatctcctgaattcctgca 260
Query: 61 attttcatttcaatttacatagtgcatttgacccaaataaaattgaaaacaaagaaacta 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttcatttcaatttccatagtgcatttgacccaaataaaattgaaaacaaagaaacta 320
Query: 121 agtagaaaaggggggagaagaacaactccacaacagtaagcaaaaaaaagagaaaaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtagaaaaggggggagaagaacaactccacaacagtaagcaaaaaaaagagaaaaagac 380
Query: 181 ctaagagtgattaataataatagtaataataatcataataatatagtcctcatggtgttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ctaagagtgattaataataatagtaataataatcataataatatagtcctcatgatgttt 440
Query: 241 atattttattgagggaagaaaagcaataaacagtaaaatatatcaattggttattatgtt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattttagtgagggaagaaaagcaataaacagtaaaatatatcaattggttattatgtt 500
Query: 301 tttatgtgctaattttgatagactatacttcctaattttccaaatacacagtacttggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatgtgctaattttgatagactatacttcctaattttccaaatacacagtacttggga 560
Query: 361 tattgtggaggtagtttgtatatataatcagagtcctcagctatgtggctttaaaacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattgtggaggtagtttgtatatataatcagagtcctcagctatgtggctttaaaacaat 620
Query: 421 gatccctgacaggctgatgggaccaaacagctgaagggacttaaactgggatga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatccctgacaggctgatgggaccaaacagctgaagggacttaaactgggatga 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
