BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-099J20.T7 (MSMg01no099_j20.b1) | MSMg01-099J20.TJ (MSMg01no099_j20.g1) |
ACC | AG315510 | AG315511 |
length | 748 | 712 |
length of high quality (start - end) | 326 (45 - 370) | 316 (73 - 388) |
definition | CHROMAT_FILE: MSMg01no099_j20.b1 PHD_FILE: MSMg01no099_j20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:57:11 2005 | CHROMAT_FILE: MSMg01no099_j20.g1 PHD_FILE: MSMg01no099_j20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:57:11 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGCCCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTT
CTGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAGATCCTTTCCCAATCTGTTGGTGGTCTTTT
TGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCATGA
GGTCCCATTTGTCAATCCTCGATCTTACAGCACAAGCCATTGCTGTTCTA
TTTAGGAATTTTTCCCCTGTACCCGTATCTTCAAGGCTTTTCCCTACTTT
CTCCTCTATAAGTTTCAGTGCCTCTGGTTTTATGTGAAGTTCTTTGATCC
ACTTAGATTTGATAAGGGACTACACCCGGCTGCTCTCCCTTCTCGCTATC
TCTCTCTCTTAGTACTTGCCGTATTATCCCCTATTTATTCGACATTCCTA
GGTTATCTTTAGTTTCCCGACGACACGCATGCTTTCCACTTGCATTTCTT
TCTATTTGTATTATAATCCTGTTGCGCCTTTTTTTTTTTGTCTGAATAAG
GTTGTCCTTTTCCTCCCTTGCCTTGTTTTTCTATCTTCCCCTTGTCTTTT
CTCCATTTTCGCCCACTTATTTCTCTTGGCCCCCTCTCTCTCCTGTTTCT
TTTCCGCCATTTTATTTTCTCATTGCCGCTCCTACTTTTTTCTTCTCG
| CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCTTGCTTTCCATGGTTGGCGTCCTTCA
CAGCTCAGATCTATAACTTTTTCTGTGGAGTAGGATAGGAGAAAGCAGCA
GACCCCCCAAGCTTTGCCCCACTCTGAATCACTCTGTGGGTGATGTTGCA
GAGACAGGGTACACACATCCACACTCCTTGCCTTTTGTGGGAGCCCTCAG
TACCAAACACCAAAGATCATAGCTGGACTACACATCCCATGAAGAACAGA
ATGAAAGATTTAGGGAAAAAGATGTCTCTAGGAAGCCCAGTGTTGAACTA
AACACTCCCAGTTTGGCTCTTGTTAAATACCAAAGGGTGAGACTAAGGCT
CTGGAAGGGGAGGGACGCTCGAGGTTAGTTTAGGATGAGCATGCCCTTTA
CCAGCTGTTCTATTGATTTGGGTTCCTGACCACAGAAGCAGAGCTCGGAC
TTGTTAGTACCGGATACCCCCGTTTATTGGCGAAGAATACGTGACTCATT
CCTTCACTTTCCCCGCTGACATAGACAGCTTACCGCTGTTGTAAACTGCC
GCAGACTGGATCTTTGCCTCACATTTCCCCCCAGCTGACTGTTATTTGTT
GCTGGGATCTTCCCCCTGCTACTTTCTGACCCTCTTCGCCTTTTTTGCCT
GCACCCCCCGCG
|
quality values | Open.Hide. 7 10 8 7 8 17 23 39 37 37 37 32 30 30 28 29 29 30 25 30 24 22 24 41 27 28 28 25 19 21 12 10 10 10 9 9 9 23 18 25 21 21 21 18 23 28 41 47 36 36
36 31 33 33 50 47 59 30 23 10 10 10 10 9 14 12 25 25 41 46 46 41 37 37 47 47 53 59 57 57 57 47 47 47 47 42 48 48 57 57 48 50 53 54 68 68 68 68 54 53
48 48 48 50 43 44 32 32 32 42 37 47 48 57 54 57 57 57 57 48 48 48 57 59 68 57 68 57 57 57 54 54 54 47 47 47 47 47 50 50 42 44 35 35 35 42 44 50 57 57
57 57 57 50 50 50 50 50 50 41 32 36 38 38 41 41 52 52 52 54 54 52 57 52 54 52 59 43 42 42 42 35 37 37 50 50 57 42 42 38 42 33 33 29 33 43 59 57 57 57
57 52 52 52 57 59 59 59 57 52 52 57 52 43 43 43 35 35 43 59 59 59 57 52 52 57 57 57 57 43 43 42 42 45 43 59 57 43 43 43 43 52 52 57 57 52 52 52 52 57
43 43 33 33 38 43 50 52 57 57 52 44 43 35 35 32 44 43 52 52 57 57 57 50 54 50 50 43 37 37 37 44 44 43 43 43 57 57 57 48 57 48 59 59 59 59 59 48 48 44
59 42 42 31 42 42 43 43 43 57 57 59 57 57 54 54 54 42 44 32 28 25 23 23 14 15 15 27 28 30 28 25 31 26 30 30 42 42 59 43 48 48 48 48 48 48 48 57 57 43
39 35 35 35 35 43 34 37 32 39 39 34 30 24 24 15 11 8 8 8 8 10 13 13 12 12 9 11 15 23 23 15 12 11 10 22 22 34 43 37 37 28 28 30 35 37 40 28 23 23
23 23 29 30 28 28 30 28 24 37 33 28 24 22 15 15 11 8 8 8 10 10 8 8 8 10 10 10 10 12 10 10 10 15 10 8 8 8 6 6 8 8 13 9 11 9 10 10 8 8
8 8 8 8 10 10 8 8 8 8 10 16 17 12 10 10 12 12 12 13 16 16 20 16 18 12 8 8 8 10 10 10 10 8 8 6 6 8 8 11 11 9 9 8 8 8 8 8 8 8
8 9 9 9 8 8 9 15 15 9 9 9 8 11 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 9 6 7 8 8 8 8 13 16 13 15 11 11 8 13 15 24 24 24
13 13 8 8 8 14 10 10 10 8 8 8 8 8 8 8 8 11 10 8 8 8 8 8 10 10 10 13 10 10 8 8 8 10 10 9 15 17 16 8 8 8 8 8 8 11 10 10 9 9
10 10 8 8 8 8 8 12 12 9 9 8 10 12 8 8 8 8 8 16 10 8 8 6 6 8 8 12 15 14 12 6 6 6 10 10 14 18 18 22 18 11 10 12 9 9 9 10 8 8
8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 7 7 8 10 9 9 9 9 9 11 11 12 12 12 8 8 8 8 8 8 8 8 10 9 8 8 9 9 8 8 8 8 8
8 8 11 11 11 11 11 11 11 11 12 9 10 10 10 13 12 13 8 8 8 13 8 8 10 10 10 10 10 11 10 14 12 12 13 21 21 15 11 11 12 9 10 9 8 10 7 7 | Open.Hide. 7 7 7 12 9 9 10 10 20 12 10 10 10 13 13 41 43 44 47 46 41 40 48 40 42 47 47 25 21 8 6 6 6 6 8 10 10 11 13 19 17 18 13 15 30 30 18 14 12 23
23 43 40 40 34 23 22 10 10 10 10 14 11 13 12 20 15 27 30 33 33 33 48 50 48 48 57 57 59 59 36 37 36 36 30 30 37 39 43 47 43 48 48 59 59 59 48 48 41 41
42 42 42 47 42 42 41 41 47 48 46 54 54 54 54 57 57 48 57 57 57 57 57 57 48 48 48 39 37 35 30 30 24 24 33 36 39 37 47 42 48 48 57 57 44 44 43 44 43 43
43 43 57 57 57 57 57 50 50 43 43 52 59 59 68 68 68 68 59 59 59 59 52 57 57 50 41 50 41 52 52 57 57 57 59 54 52 52 52 52 37 57 57 57 57 57 57 57 57 52
52 57 57 44 52 52 32 28 12 12 12 38 38 52 45 42 42 35 43 35 43 43 43 35 43 43 57 57 52 52 52 52 52 52 57 57 44 43 35 22 22 14 18 18 43 43 43 31 35 35
43 31 34 27 20 20 20 35 38 43 43 39 39 39 43 43 52 52 43 43 35 35 35 43 44 62 62 52 43 43 31 31 18 26 12 26 15 15 11 11 11 18 27 33 35 43 39 39 35 35
26 26 23 19 20 35 35 43 43 43 43 31 31 31 43 35 28 18 13 13 13 17 36 34 35 35 35 43 43 43 42 42 43 57 57 45 52 43 44 43 27 18 27 15 27 23 43 38 43 33
32 42 42 43 57 43 36 32 27 32 36 36 27 28 16 10 10 13 23 38 43 23 23 20 27 20 20 32 38 38 43 24 19 12 10 10 12 12 12 10 12 18 26 18 12 12 24 24 32 27
28 27 18 18 14 12 12 15 18 20 21 24 15 11 11 12 16 15 12 12 11 12 11 14 10 11 11 13 19 32 32 21 16 11 12 15 19 12 13 12 14 12 14 14 18 28 37 43 43 37
37 40 40 28 28 24 22 22 24 28 37 39 39 39 37 37 33 28 21 13 13 13 24 28 32 35 32 25 18 12 11 8 6 8 8 8 8 12 11 12 12 11 13 13 10 10 10 10 10 15
17 15 11 10 10 10 10 10 11 11 13 8 8 8 8 8 8 9 10 10 10 10 10 8 8 11 10 8 8 8 8 8 8 15 25 24 26 15 16 11 11 9 10 8 8 8 8 9 9 9
10 11 12 21 12 12 12 22 22 28 20 24 13 9 9 10 9 10 10 10 10 10 15 12 12 10 10 10 12 14 19 13 10 10 10 18 19 17 15 15 12 12 11 10 8 8 10 8 8 9
9 9 8 8 8 10 10 9 9 12 11 14 18 20 22 14 14 11 9 8 8 8 10 12 8 8 9 12 11 10 9 9 9 9 9 15 15 12 12 11 10 8 8 8 8 10 8 6 6 8
8 8 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 13 15 10 8 8 8 11 15 15 10 10 8 8 8 10 10 13 12 14 18 27 24 22 16 14 14 14 12
10 8 8 8 8 8 13 13 11 9 9 9 |