Query= MSMg01no101_a13.b1 MSMg01no101_a13.b1 CHROMAT_FILE:
MSMg01no101_a13.b1 PHD_FILE: MSMg01no101_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:06 2005
(294 letters)
>mm_chr2_79556804_79557497
Length = 694
Score = 532 bits (275), Expect = e-155
Identities = 292/303 (96%), Gaps = 9/303 (2%)
Strand = Plus / Minus
Query: 1 tttgtagaatatttgtgtctcagaagt---------aacaacaacaacaacaacaacaac 51
||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 479 tttgtagaatatttgtgtctcagaagtaacaacaacaacaacaacaacaacaacaacaac 420
Query: 52 aacaacaacttaaaatgtgagatgatattcagattgacttatgaaagcatgattatatct 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aacaacaacttaaaatgtgagatgatattcagattgacttatgaaagcatgattatatct 360
Query: 112 aaaatctggttttgctttaacttcctttgtaggtttgtctaatttaaaagacttgaatga 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaaatctggttttgctttaacttcctttgtaggtttgtctaatttaaaagacttgaatga 300
Query: 172 tcttatgttctcaaagcaaactgcagctcaaatctcaacataaaataaaataaaacaata 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcttatgttctcaaagcaaactgcagctcaaatctcaacataaaataaaataaaacaata 240
Query: 232 taaaataaaataaaattataaaataaaatacttgcttcttagcccctggtaatttctcct 291
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 taaaataaaataaaaaaataaaataaaatacttgcttcttagcccctggtaatttctcct 180
Query: 292 gtt 294
|||
Sbjct: 179 gtt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no101_a13.g1 MSMg01no101_a13.g1 CHROMAT_FILE:
MSMg01no101_a13.g1 PHD_FILE: MSMg01no101_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:06 2005
(247 letters)
>mm_chr2_79387513_79388160
Length = 648
Score = 416 bits (215), Expect = e-121
Identities = 239/249 (95%), Gaps = 7/249 (2%)
Strand = Plus / Plus
Query: 1 tccatcacg-tacacatggggtagggaaggaagaactgcatgaagagattaggaaggaat 59
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tccatcacgttacacatggggtaggggaggaagaactgcatgaagagattaggaaggaat 260
Query: 60 atagagacaaatatagactccagatgacagtggcccagcagtcatagggcaggtactggc 119
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 atagagacaaatatagactccagatgacagtggcccagcagtcatagggaaggtactggc 320
Query: 120 taaagcaagctgtgatgccctcgatggatgtcaaataacaag----agacaggattgtcc 175
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 taaagcaagctgggatgccctcgatggatgtcaaataacaagtaagagacaggattgtcc 380
Query: 176 ttcagctttggtgatataaaggccagtgggaaccttgcctag-agctctgcaggctgagt 234
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 381 ttcagctttggtgatataaaggccagtgggaaccttgcc-aggagctctgcaggctgagt 439
Query: 235 gggattcgg 243
|||||||||
Sbjct: 440 gggattcgg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
