Query= MSMg01no102_b07.b1 MSMg01no102_b07.b1 CHROMAT_FILE:
MSMg01no102_b07.b1 PHD_FILE: MSMg01no102_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:33 2005
(454 letters)
>mm_chr2_59420937_59421795
Length = 859
Score = 739 bits (382), Expect = 0.0
Identities = 436/458 (95%), Gaps = 9/458 (1%)
Strand = Plus / Plus
Query: 4 gaattcctggggtgcca---ttaaaactaacttttcaaacagatgcacatattttactgc 60
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctggggtg--aatattaaaactaacttttcaaacagatgcacatattttactgc 261
Query: 61 ttaagctgaagtatttaaattatgataatactttcttgatgtgggtgaaactttcaaatt 120
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 ttaagttgaagtatttaaattatgataatactttcttggtgtgggtgaaactttcaaatt 321
Query: 121 ccaacatcatttttttttaagtgacagctttcctattgactttgtt----gcaagaggga 176
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 322 ccaacatcatttttttttaagtgacagcttttctattgactttgtttgttgcaagaggga 381
Query: 177 cctctgttgcccaagttggcctcaaacctggtatgtaactgaggtggcttgaatgagcat 236
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 382 cctctgttgcccaagttggcctcaaacctggtatgcaactgaggtggtttgaatgagcat 441
Query: 237 ggcccccatggagtcatctgttcgaacatttggcctccagttggtggaactgtgtgggaa 296
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 442 ggcccccatggagtcatctgttccaacacttggcctccagttggtggaactgtgtgggaa 501
Query: 297 ggattagaaggtgtggtcttgttgaaggaggtgtgccactgggtatggtcttgaggtttc 356
||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 502 ggattaggaggtgtggtcttgttgaaggaggtgtgtcactggggatgggcttgaggtttc 561
Query: 357 aaaagactcccgccattcccagcgtgttctctgccttctccttgtggattccgacatgag 416
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 562 aaaagactcccgccattcccagcgtgttctctgccttctccttgtggattccaacatgag 621
Query: 417 atctcaactgttctcatgcctgagcagcacgccatggg 454
||||||||||||||||||||||||||||||| ||||||
Sbjct: 622 atctcaactgttctcatgcctgagcagcacgtcatggg 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 859
Length adjustment: 10
Effective length of query: 444
Effective length of database: 849
Effective search space: 376956
Effective search space used: 376956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_b07.g1 MSMg01no102_b07.g1 CHROMAT_FILE:
MSMg01no102_b07.g1 PHD_FILE: MSMg01no102_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:33 2005
(452 letters)
>mm_chr2_59534463_59535314
Length = 852
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%), Gaps = 1/452 (0%)
Strand = Plus / Minus
Query: 1 caggacagccagggctacacagagaaatgctgtattggaaaaaaaccaaaacaacaccag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 702 caggacagccagggctacacagagaaatgctgtattgg-aaaaaaccaaaacaacaccag 644
Query: 61 ccacgagcttgtcctaggcccccacatacgctgtggtggctcttggagaggcctgagctt 120
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 643 ccatgagcttgtcctaggcccccacatactctgtggtggctcttggagaggcctgagctt 584
Query: 121 gacccttcggccatctcaggcctcgccttgtccacaaagctgcccttattgggccaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gacccttcggccatctcaggcctcgccttgtccacaaagctgcccttattgggccaccag 524
Query: 181 gtcattcttaatttacagcaaaactaccatgctacagaacaaggtctaggtgacattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtcattcttaatttacagcaaaactaccatgctacagaacaaggtctaggtgacattgag 464
Query: 241 ttttggcaccttgtcccagacatcctgctggcctgtgtcgggagcacagctgttttttag 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttttggcacctcgtcccagacatcctgctggcctgtgtcgggagcacagctgttttttag 404
Query: 301 gatggtcacatcttctgtgtcagcggtgttaggtataaaaggctatcaaatatctactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gatggtcacatcttctgtgtcagcggtgttaggtataaaaggctatcaaatatctactgt 344
Query: 361 aagtttctcttccaggttcccactgtctcatgaacagctgacttgggggaaagttcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aagtttctcttccaggttcccactgtctcatgaacagctgacttgggggaaagttcaaac 284
Query: 421 ccagtgataaaagctgttcagacagtgcctcg 452
||||||||||||||||||||||||||||||||
Sbjct: 283 ccagtgataaaagctgttcagacagtgcctcg 252
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
