Query= MSMg01no103_c09.b1 MSMg01no103_c09.b1 CHROMAT_FILE:
MSMg01no103_c09.b1 PHD_FILE: MSMg01no103_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:58 2005
(630 letters)
>mm_chr2_62432200_62433229
Length = 1030
Score = 1160 bits (600), Expect = 0.0
Identities = 620/628 (98%), Gaps = 4/628 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggctg--ttttcgcatttccagaagggaaatagagagagcttgtaaggaaagt 62
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaattcaggctgcattt--gcatttccagaagggaaatagagagagcttgtaaggaaagt 773
Query: 63 attgttcattctcccgcagcataaaatactcatgaaatctctaaacaagagcatgagtca 122
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 772 attgctcattctcccgcagcataaaatactcatgaaatctctaaacaagagcgtgagtca 713
Query: 123 gagcaagaagcacaaaacaaggcacagagttgatgctgttctaagaattgtaagatttat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gagcaagaagcacaaaacaaggcacagagttgatgctgttctaagaattgtaagatttat 653
Query: 183 gatgttaatttgaaactttaaaagtttgttcatttttgcagtacttagtcttgctagata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gatgttaatttgaaactttaaaagtttgttcatttttgcagtacttagtcttgctagata 593
Query: 243 cgtctttgtttttgtgcatagagtgtgtaataagatcaacttggatgaggatcattacta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cgtctttgtttttgtgcatagagtgtgtaataagatcaacttggatgaggatcattacta 533
Query: 303 gtttgggaactttgagacaaagccacttaccatctttgaggccaaaggacataatgacta 362
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 532 gtttgggaactttgagacaaagccacttaaaatctttgaggccaaaggacataatgacta 473
Query: 363 tattgaagagctgttatagacatacaggccctgaattgaacaatgccagcagttagcatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tattgaagagctgttatagacatacaggccctgaattgaacaatgccagcagttagcatg 413
Query: 423 cacaagaaagaaccacaaggcccagtggaaagagtcttgggacaagctgaagctgctaca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cacaagaaagaaccacaaggcccagtggaaagagtcttgggacaagctgaagctgctaca 353
Query: 483 gtagtcaaggaatgtgaaagagcatagtagtagatatgcatttaatctttaagtaaaata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtagtcaaggaatgtgaaagagcatagtagtagatatgcatttaatctttaagtaaaata 293
Query: 543 catgcagaattgaagtctgtcacatcaacacttatcataaaaggccatcccaggaaagag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 catgcagaattgaagtctgtcacatcaacacttatcataaaaggccatcccaggaaagag 233
Query: 603 taacaagcatgtttgttaatgtgccatt 630
||||||||||||||||||||||||||||
Sbjct: 232 taacaagcatgtttgttaatgtgccatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_c09.g1 MSMg01no103_c09.g1 CHROMAT_FILE:
MSMg01no103_c09.g1 PHD_FILE: MSMg01no103_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:58 2005
(210 letters)
>mm_chr2_62290999_62291606
Length = 608
Score = 354 bits (183), Expect = e-102
Identities = 199/207 (96%), Gaps = 6/207 (2%)
Strand = Plus / Plus
Query: 1 aaagggcagagagagagagagagatttccaacaatggccagggccctcgagggagcattt 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaagggcagagagagagaga----tttccaacaatggccagggccctcgagggagcattt 260
Query: 61 ggctcatagtatcctagagagagaaggaatcagaatccaggagctaaaattgatgctgaa 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctcatagtatcctagagaga--aggaatcagaatccaggagctaaaattgatgctgaa 318
Query: 121 tgattgagagctacagagagagtcacaggtgacccctaaaaaggcatgtccagcctgtct 180
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 319 tgatcgagagctacagagagagtcacaggtgacccctaaaaagggatgtccagcctgtct 378
Query: 181 gctcggccagaactgtgatacgctcca 207
|||||||||||||||||||||||||||
Sbjct: 379 gctcggccagaactgtgatacgctcca 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 608
Length adjustment: 9
Effective length of query: 201
Effective length of database: 599
Effective search space: 120399
Effective search space used: 120399
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
