NTATCATAATTTGCGGCGCTAAACGACTCCTATAGTCAGAAATGCGCGGA
ATTCCAACTGATTACACAGAATGGCTGAGAAGCACCTGAAAAGATGTTCA
ACATCCTTAATCATCAGAGAAATGAAAATCGAAAACACCCTGAGAATTCA
CCTTACACCAGTCAGAATGACGAAGATCAAATATTCAGGTGACAGCAGAT
GCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGAGAT
TGCAAGCTGGTACAATCACTCTGGAAATCTGGTGGTTCCTCAGAAAATTG
GACATAGTACTACAGGAGGATCTTTTTATACCTCTCCTGGGCATATATTC
AGAAGATGTTCAAATTGGTAATAAGAACACATGCTCCACTATGTTCAAAG
GACCCTTATTTATAATATCCAGAAGTTGGAAAGAGCCCAGATGTCCCTCG
ACAGAGGAATAGATACAGAAAATGTGGTACATTTACACAATGGAGTACTA
CTCAGCTCTTAAAAATAATTAACTTATGAAATTCCTAGGCAAATGGATGG
ATCTGGAGGGTATCATCCTGAGTGAGGTAACCCAATTACAAAAGAATTCA
CATGATATGCACTCACTGATAAGTGGATATTAGCCCAAAAGCTTAGAATA
CCCAAGATACAATTTCCAAAACACATGAAACTCAAGCAGAAGGAAGACCA
AAATGTG

TGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTATGTGCTTGCAGAACAGGTCCTTATAGGGA
GAGAGGAAGTTAAATCTATAATTTGGCCACCAGGCTACATGAATACCTCC
AGGGTGGCAGAGGTGGGGTCATCATAGAGGCTACATGCTTCTGGGCAAGT
GGACCAGAGCAAGAAGGGAACACACCTAACTCCTGTTGGGCTCAGGATGA
GAATTTTGGAGTTTGGATACACCATCACCCACACTGATTCCCAAAGGCAT
AGGGCTTTATGGGACCACATTATTATTCCAATATGTGAGCCAAGGAAGAA
AGCTGCTAGAATGCTTGCTTTTACCAAACAAATAATAAATTACAGATTCC
AGCCTGCATCTGCTCTGTAGCTGCTTAATATTCATTGCACGAAAAGCTTA
CTGGATCATCATCAATCATGCTTAGCTGCACTTAATGTTTTCTGTAGAAT
TTAATAAGTTTTTTTTTATTAGTGTGACTATCCTTAAGAGTTTTATAAAA
ACTATTACAGGTCTTTTAATTATGTTACATAACTTAGGATATTTTAAATT
CATAGTTTCTTTTTTTGGTATAGCAGTGAGAAAGAGTTAATATTAAGAGA
CTATAACATATTTCACTCTAAAACAAATTTAAATGATTATTTACATTATG
CTATTTTATTTTTCTTCCTTTATTTTTTA

Query= MSMg01no103_m23.g1 MSMg01no103_m23.g1 CHROMAT_FILE:
MSMg01no103_m23.g1 PHD_FILE: MSMg01no103_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:51 2005
         (616 letters)



>mm_chr2_99238687_99239698
          Length = 1012

 Score = 1122 bits (580), Expect = 0.0
 Identities = 606/616 (98%), Gaps = 4/616 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgtgcttgcagaacaggtccttatagggagagaggaagttaaatctataatttggcca 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 911 tatgtggttgcagaacaggtccttatagggagagaggaagttaaatctataatttggtca 852

                                                                       
Query: 61  ccaggctacatgaatacctccagggtggcagaggtggggtcatcatagaggctacatgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ccaggctacatgaatacctccagggtggcagaggtggggtcatcatagaggctacatgct 792

                                                                       
Query: 121 tctgggcaagtggaccagagcaagaagggaacacacctaactcctgttgggctcaggatg 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 791 tctgggcaagtggaccagagcaagaagggaacactcctaactcctgttgggctcaggatg 732

                                                                       
Query: 181 agaattttggagtttggatacaccatcacccacactgattcccaaaggcatagggcttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agaattttggagtttggatacaccatcacccacactgattcccaaaggcatagggcttta 672

                                                                       
Query: 241 tgggaccacattattattccaatatgtgagccaaggaagaaagctgctagaatgcttgct 300
           |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgggaccacagtaatattccaatatgtgagccaaggaagaaagctgctagaatgcttgct 612

                                                                       
Query: 301 tttaccaaacaaataataaattacagattccagcctgcatctgctctgtagctgcttaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttaccaaacaaataataaattacagattccagcctgcatctgctctgtagctgcttaat 552

                                                                       
Query: 361 attcattgcacgaaaagcttactggatcatcatcaatcatgcttagctgcacttaatgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 attcattgcacgaaaagcttactggatcatcatcaatcatgcttagctgcacttaatgtt 492

                                                                       
Query: 421 ttctgtagaatttaataagtttttttttattagtgtgactatccttaagagttttataaa 480
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttctgtagaatttaataag--tttttttattagtgtgactatccttaagagttttataaa 434

                                                                       
Query: 481 aactattacaggtcttttaattatgttacataacttaggatattttaaattcatagtttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aactattacaggtcttttaattatgttacataacttaggatattttaaattcatagtttc 374

                                                                       
Query: 541 tttttttggtatagcagtgagaaagagttaatattaagagactataacatatttcactct 600
           |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||
Sbjct: 373 tttttttggtatagcagtgagaaagagttaatattaagagactaaaac--atttcactct 316

                           
Query: 601 aaaacaaatttaaatg 616
           ||||||||||||||||
Sbjct: 315 aaaacaaatttaaatg 300


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1012
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1002
Effective search space:   607212
Effective search space used:   607212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)