Query= MSMg01no103_n07.b1 MSMg01no103_n07.b1 CHROMAT_FILE:
MSMg01no103_n07.b1 PHD_FILE: MSMg01no103_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:52 2005
(249 letters)
>mm_chr2_157115303_157115951
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Plus
Query: 1 tagtcctataagaaagtctatttccctttaagtgttcactgtaatagtttttagatcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtcctataagaaagtctatttccctttaagtgttcactgtaatagtttttagatcact 260
Query: 61 ttttcttacagttcttctctctcttatggaaggctttgaggttgtctttcccttctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcttacagttcttctctctcttatggaaggctttgaggttgtctttcccttctttaa 320
Query: 121 cctttaaaaacattccgtgcatcctcacctcagattctcgatcattcagtcgatgtagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttaaaaacattccgtgcatcctcacctcagattctcgatcattcagtcgatgtagat 380
Query: 181 tactttaagtggacaagcagcgtgttgttatcctttgggaggtttctgttgctgtgatga 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tactttaagtggacaagcagcgtgttgttatcctttgggagatttctgttgctgtgatga 440
Query: 241 aacggcatg 249
|||||||||
Sbjct: 441 aacggcatg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_n07.g1 MSMg01no103_n07.g1 CHROMAT_FILE:
MSMg01no103_n07.g1 PHD_FILE: MSMg01no103_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:52 2005
(270 letters)
>mm_chr2_157191017_157191686
Length = 670
Score = 375 bits (194), Expect = e-108
Identities = 229/252 (90%), Gaps = 19/252 (7%)
Strand = Plus / Minus
Query: 1 ttctttaccctctattcaaagatatatcagaacttaacctctactattccagaatgtgat 60
|||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 498 ttctttaccctctattcaaagatatatcagaacttaacctctac------------tg-- 453
Query: 61 tctatttccagaatgtgattctatttgtaggcaggatttttgtgggggaaggggttgcag 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 452 -----ttccagaatgtgattctatttggaggcaggatttttgtgggggaaggggttgcag 398
Query: 121 tgaaccttatggacggcattcaagagaatagggctccctaagcccctccccttcttccac 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgaaccttatggacggtgttcaagagaatagggctccctaagcccctccccttcttccac 338
Query: 181 gggtctaggatagaaactgtgatgggtctcagtgctggggctgagttgggacagggactc 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 337 gggtctaggatagaaactgtgatgggtcttagtgctggggctgagttgggacagggactc 278
Query: 241 ctcagcagccta 252
||||||||||||
Sbjct: 277 ctcagcagccta 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
