GTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATCTGGTACCTGTATTTCTTTATCATTGCTAGTCCCCAATTA
CCACACAGAAAAAACAAGATTTGTTTTAAGCTGCACCTTAATATCTATTT
AAATTGATCTACTTTAACCCCCTATGCTAATCTGGCTACCTCCCATCCAT
AATACCAAAAACTTGCAATTAAGGCCTCAGGTGTTTCTTCTCATGGTGTT
TTCTTAGACCCTTTCCTCCCCATGGCTGATCTGAATCTCCCTCCTTCTCG
CTGTCCTTCCCCCGGCAGGTGAAAACTTCTACCCTATCTCTCTTCTGTCT
AGCCATTGGGTGATCAGTATTTATTGACCAGGCAAAGAATAAATAATAAT
AATTGTTTACACAAACTTGACACAGAAGATTTTAGACATAAGCATTACAA
TGCCATATCCAGATTGAAACAAGATATGTGGGCAGAGAAATCAGTATTTG
AATAACACAAGGATAACATTTACACAGGCACAAAAACATTATGCCTATAG
ACTGATTCATTACCTTTAATTTGACACGAAGACACATTAATTTCTATGAA
ATGGAAGAAATTGCACCACGGCTTAATACTCATTATAAATTACTGGACAT
AATTTGTATTACCAGTTCATCCCTTGCCACTCTAACAGCAAGTACGTGTC
TATTTTATGGCAA

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTGAAGGATGGAAGTTATAA
TATGTGGAGAATTATTGAAATAAATGCTACCTCTTTAAACTGAGTTATTT
AAAATGATTTGGACACTGGTATCTTTCTTAGCAATATGCAAATGATCAAG
CTTATTACATCTGTATTTATTTGCTACATTTTATCCACATCTCTTTTCCT
GCTCCCATTTTCTTCCGTCTCTGTAGCCTCTGTCTTGCTCTTTCTTTTAA
ATTAACTGATCATGACTCTCTTTACCAATTAGCTTATCAGCTTGAACACT
GTTGTTTTTGTTGGTTGTAATTACAGTGTACATTTTATATTAGTCAGTTT
TACTTCAAGGAAACTGTTTCACTTAATATATAAGGACATTATACAATAAA
TAGGTAGTCCTTCCTTTGCTATTTGTGAATTAGTGAATGATACAATGAAG
CCTGTGTTTTGCATGTCACACGAACATTGTAGTTATTTTTGTTACAAGCA
GTCAGCTATCATTTAAGTTATTTTAAAGATAAGGAATCTCTTAGAATTGA
TTTCCTTTTCTTTTCTACCTTTTAAAGAATACCCTACATCTAAGGTATGT
TTGCTCACTGGCTTCTTGGAAGACAGTAATTTCCCAGAGCCTGAATCCTT
CATACAG

Query= MSMg01no103_o02.g1 MSMg01no103_o02.g1 CHROMAT_FILE:
MSMg01no103_o02.g1 PHD_FILE: MSMg01no103_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:56 2005
         (623 letters)



>mm_chr2_8633636_8634658
          Length = 1023

 Score = 1174 bits (607), Expect = 0.0
 Identities = 619/623 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgaaggatggaagttataatatgtggagaattattgaaataaatgctacctctttaa 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgaacgatggaagttataatatgtggagaattattgaaataaatgctacctctttaa 260

                                                                       
Query: 61  actgagttatttaaaatgatttggacactggtatctttcttagcaatatgcaaatgatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgagttatttaaaatgatttggacactggtatctttcttagcaatatgcaaatgatca 320

                                                                       
Query: 121 agcttattacatctgtatttatttgctacattttatccacatctcttttcctgctcccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 agcttattacatctgtatttatttgctacattttatccacatctcttttcctgctcccac 380

                                                                       
Query: 181 tttcttccgtctctgtagcctctgtcttgctctttcttttaaattaactgatcatgactc 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcttctgtctctgtagcctctgtcttgctctttcttttaaattaactgatcatgactc 440

                                                                       
Query: 241 tctttaccaattagcttatcagcttgaacactgttgtttttgttggttgtaattacagtg 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttaccaattagcttatcagctttaacactgttgtttttgttggttgtaattacagtg 500

                                                                       
Query: 301 tacattttatattagtcagttttacttcaaggaaactgtttcacttaatatataaggaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacattttatattagtcagttttacttcaaggaaactgtttcacttaatatataaggaca 560

                                                                       
Query: 361 ttatacaataaataggtagtccttcctttgctatttgtgaattagtgaatgatacaatga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatacaataaataggtagtccttcctttgctatttgtgaattagtgaatgatacaatga 620

                                                                       
Query: 421 agcctgtgttttgcatgtcacacgaacattgtagttatttttgttacaagcagtcagcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcctgtgttttgcatgtcacacgaacattgtagttatttttgttacaagcagtcagcta 680

                                                                       
Query: 481 tcatttaagttattttaaagataaggaatctcttagaattgatttccttttcttttctac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatttaagttattttaaagataaggaatctcttagaattgatttccttttcttttctac 740

                                                                       
Query: 541 cttttaaagaataccctacatctaaggtatgtttgctcactggcttcttggaagacagta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttttaaagaataccctacatctaaggtatgtttgctcactggcttcttggaagacagta 800

                                  
Query: 601 atttcccagagcctgaatccttc 623
           |||||||||||||||||||||||
Sbjct: 801 atttcccagagcctgaatccttc 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)