Query= MSMg01no106_g24.b1 MSMg01no106_g24.b1 CHROMAT_FILE:
MSMg01no106_g24.b1 PHD_FILE: MSMg01no106_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:51 2005
(496 letters)
>mm_chr2_42361086_42361982
Length = 897
Score = 833 bits (431), Expect = 0.0
Identities = 452/459 (98%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 1 tggtgactaaatgtattagaggcttcccagaattctttcaaagtatcaaggaaatacaaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgactaaacgtattagaggcttcccagaattctttcaaagtatcaaggaaatacaaa 260
Query: 61 aacctgaaccaaaactattgttcttaaagataaaaacttaggaaatatgctttaatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctgaaccaaaactattgttcttaaagataaaaacttaggaaatatgctttaatatat 320
Query: 121 aaatatgtcactttttgcactattgtaatttgtgttcttttatttaaacatcaaccagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatatgtcactttttgcactattgtaatttgtgttcttttatttaaacatcaaccagag 380
Query: 181 attatattattttagcaggtaattaagagtaataatcaatttattagtcgtaagtaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatattattttagcaggtaattaagagtaataatcaatttattagtcgtaagtaattt 440
Query: 241 tatcatcaatggatttatatatggatttgattttgtcaattatgagttcacatattccct 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tatcatcaatggatttatatatggattcgattttgtcaattatgagttcacatattccct 500
Query: 301 tatatactaatattgcatgatactttaaaatctctgaaaacacaacttttctcaaaagag 360
|||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||
Sbjct: 501 tatatactaatattgcatgatactttaaaaactccgaaaacacaatttttctcaaaagat 560
Query: 361 taagaattaaattttattccattttctactggcatattgtaatagagataataatatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagaattaaattttattccattttctactggcatattgtaatagagataataatatgct 620
Query: 421 gaaataatttattacttg-ctgtaattgcatacattctg 458
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gaaataatttattacttgtctgtaattgcatacattctg 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 897
Length adjustment: 10
Effective length of query: 486
Effective length of database: 887
Effective search space: 431082
Effective search space used: 431082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_g24.g1 MSMg01no106_g24.g1 CHROMAT_FILE:
MSMg01no106_g24.g1 PHD_FILE: MSMg01no106_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:52 2005
(346 letters)
>mm_chr2_42437620_42438365
Length = 746
Score = 582 bits (301), Expect = e-170
Identities = 336/355 (94%), Gaps = 12/355 (3%)
Strand = Plus / Minus
Query: 1 ataatgagaagcttcaaggatttcaatacccttcacttaaagacaatataaaacttatgc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ataatgaggagcttcaaggatttcaatacccttcacttaaagacaatataaaacttatgc 592
Query: 61 gtactttacagactataagaaatatatttatgtaca------------atacagtaggaa 108
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 591 gtactttacagactataagaaatatatttatgtacaataaaaacatccatacagtaggaa 532
Query: 109 caatattgaagtcttatcctatatttcattacattttcttagattctgtgataattgcta 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 caatattgaagtcttatcctatatttcattacattttcttagattctgtgataattgcta 472
Query: 169 tattactgtaaccactaactgaggaatttaaaatttcaacagaatttccttaattttaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tattactgtaaccactaactgaggaatttaaaatttcaacagaatttccttaattttaaa 412
Query: 229 ttatagaaatgttaacatgcctttcatgttacaatataaaataacagatttttaaaggaa 288
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 411 ttatagaaatgttaacatgcctttcatgttacaatatgtaataacagatttttaaaggaa 352
Query: 289 aaattcattcgtcgctattctcattttcttaaaagactaaataaaatagaaataa 343
||||||||||||| |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 351 aaattcattcgtcattattttcattttcttgaaagactaaataaaatagaaataa 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
