Query= MSMg01no106_p20.b1 MSMg01no106_p20.b1 CHROMAT_FILE:
MSMg01no106_p20.b1 PHD_FILE: MSMg01no106_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:11 2005
(335 letters)
>mm_chr2_70547340_70548082
Length = 743
Score = 553 bits (286), Expect = e-162
Identities = 324/340 (95%), Gaps = 13/340 (3%)
Strand = Plus / Minus
Query: 7 agagagagagagagagag-aggagctgggcatcataacacatacctgcaacctcggaatc 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agagagagagagagagagaaggagctgggcatcataacacatacctgcaacctcggaatc 505
Query: 66 agggatgtgtgg-gg---gagagagcattatagcctggctgggcctataaaaaggtagac 121
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agggatgtgtggaggagagagagagcattatagcctggctgggcctataaaaaggtagac 445
Query: 122 agacagacagacca----atctatctatctttggaagcctgaaatgtcacttttcagtgg 177
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agacagacagaccaatctatctatctatctttggaagcctgaaatgtcacttttcagtgg 385
Query: 178 tgacaaaaatcaaagagcaagtgtgactttttatatcatcataaaagagcaaacctaaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgacaaaaatcaaagagcaagtgtgactttttatatcatcataaaagagcaaacctaaag 325
Query: 238 aaaagtgttggaacgctgtcatca-tgcactgttggtgctgagtcactggta-tgcaccc 295
||||||||||||||||||||| || | ||||||||||||||||||||||| | ||||||
Sbjct: 324 aaaagtgttggaacgctgtcagcact-cactgttggtgctgagtcactgg-agcgcaccc 267
Query: 296 ttgtgactaagctcatttcaggtaagatgaaagtgagtgc 335
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 266 ttgtgactaagctcatttcaggtaagatgaaggtgagtgc 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 743
Length adjustment: 9
Effective length of query: 326
Effective length of database: 734
Effective search space: 239284
Effective search space used: 239284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_p20.g1 MSMg01no106_p20.g1 CHROMAT_FILE:
MSMg01no106_p20.g1 PHD_FILE: MSMg01no106_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:12 2005
(182 letters)
>mm_chr2_70440751_70441333
Length = 583
Score = 323 bits (167), Expect = 4e-93
Identities = 173/175 (98%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1 aggtgagggaggccaggtggtgcgctctcttgaaagcctgtcttagttcatttttctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgagggaggccaggtggtgcgctctcttgaaagcctgtcttagttcatttttctagc 260
Query: 61 aactgtgttatctcaaagaggccaagcctgtgggaagaaagggctaaagtaacaaagcaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 aactgtgttatctcaaagaggccaagcctgtgggaagaaagagctaaagtaacaaagcaa 320
Query: 121 tcattttttaaaagactttttaaatcatttaaaattctgtgtagatg-ggggggg 174
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tcattttttaaaagactttttaaatcatttaaaattctgtgtagatgtggggggg 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 583
Length adjustment: 8
Effective length of query: 174
Effective length of database: 575
Effective search space: 100050
Effective search space used: 100050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
