TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGCTATAGTCTTCTTTCCCCCTTATTATTTTCCTTGGGGGAGCCTC
ATAAGGAGACTCTTCCACCATCTTAGGAGAATGGTAGAAAGCATCTTTGT
TTCTAAGAGAAACAGCTGTACTTTTCTGTCGTTAGGAAGGAGATAAGGGT
AGCTGTCATTTCCATCCTTGAAATCACCAGAGTTTTTAAGATACTGGCAG
ACACAGCCTTCAGACCAAAATAGTCTAAAGTAATCACAGACATTAAGTAT
TCAAATTCAGTGATTCTCAACCTGTTTAGATTTTTGTTTAAGCTCCACCT
CGGTTCTTTTTAATCCCACTGTCCTCTTAACCTTAGGACCCTAAGGAATT
TCTTCTCATCTTGACCCACTGTAATTAGAGTTGACTTTATATCCCGAATA
AAGTGTTAAAAGTGTTTTACAAATCTTCCTGTCATTTTTAGTAGTCAGGC
TTTAAAGTTCCAGTAAAAACTTGGAGTTAACCAGAGAAAGCTAATAATGG
CACACTAAAGTGATATTATTTGACAGAAGGAAAGAAACGAATGTTCTAGT
TGGTGGGTCTAGTCTCTTTGTGGTTAACTTGTATACACAGCCTAAGACTT
GGACTCATTAAGAATAGTTTGTAGATTCCTGTTTTTACCTTTTATGTGGT
TA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGAAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCACCATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGTGTGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCAAAATCTAGGATACCCAAGATATAAGATACAATTTCCTA
A

Query= MSMg01no108_a06.b1 MSMg01no108_a06.b1 CHROMAT_FILE:
MSMg01no108_a06.b1 PHD_FILE: MSMg01no108_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:42 2005
         (658 letters)



>mm_chr2_37276902_37277963
          Length = 1062

 Score = 1239 bits (641), Expect = 0.0
 Identities = 653/659 (99%), Gaps = 4/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgctatagtcttctttcccc----cttattattttccttgggggagcctcata 59
           |||||||||||||||| ||||||||||    |||||||||||||||||||||||||||||
Sbjct: 862 ggaattctgctatagttttctttccccctttcttattattttccttgggggagcctcata 803

                                                                       
Query: 60  aggagactcttccaccatcttaggagaatggtagaaagcatctttgtttctaagagaaac 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aggagactcttccaccatcttaggagaatggtagaaagcatctttgtttctaagagaaac 743

                                                                       
Query: 120 agctgtacttttctgtcgttaggaaggagataagggtagctgtcatttccatccttgaaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agctgtacttttctgtcgttaggaaggagataagggtagctgtcatttccatccttgaaa 683

                                                                       
Query: 180 tcaccagagtttttaagatactggcagacacagccttcagaccaaaatagtctaaagtaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcaccagagtttttaagatactggcagacacagccttcagaccaaaatagtctaaagtaa 623

                                                                       
Query: 240 tcacagacattaagtattcaaattcagtgattctcaacctgtttagatttttgtttaagc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcacagacattaagtattcaaattcagtgattctcaacctgtttagatttttgtttaagc 563

                                                                       
Query: 300 tccacctcggttctttttaatcccactgtcctcttaaccttaggaccctaaggaatttct 359
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 562 tccacctcggttctttttaatcccactgtcctcctaaccttaggaccctaaggaatttct 503

                                                                       
Query: 360 tctcatcttgacccactgtaattagagttgactttatatcccgaataaagtgttaaaagt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tctcatcttgacccactgtaattagagttgactttatatcccgaataaagtgttaaaagt 443

                                                                       
Query: 420 gttttacaaatcttcctgtcatttttagtagtcaggctttaaagttccagtaaaaacttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gttttacaaatcttcctgtcatttttagtagtcaggctttaaagttccagtaaaaacttg 383

                                                                       
Query: 480 gagttaaccagagaaagctaataatggcacactaaagtgatattatttgacagaaggaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gagttaaccagagaaagctaataatggcacactaaagtgatattatttgacagaaggaaa 323

                                                                       
Query: 540 gaaacgaatgttctagttggtgggtctagtctctttgtggttaacttgtatacacagcct 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaaacgaatgttctagttggtgggtctagtctctttgtggttaacttgtatacacagcct 263

                                                                      
Query: 600 aagacttggactcattaagaatagtttgtagattcctgtttttaccttttatgtggtta 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagacttggactcattaagaatagtttgtagattcctgtttttaccttttatgtggtta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1062
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1052
Effective search space:   681696
Effective search space used:   681696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)