CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGAGGATGTCACAATGAGCCTTTACGCTTCTGTCTGTACCTCTCAACA
CATTTATTTTCATACCCTGAGCATCCGTGTAAGACGTCTGACTACCCATC
TGAATGTAGAAGGGAGGTGAGGCCCTCAGAGAAAGGGGAGTGGATAGGTT
CATAGTGAGACCATCATTTTGTCTTCCTTATAAAGGTGACAACTGGGGGA
ATCATCATTTGGGGCACTCAGATCTGTGGTCTAAGATGAATATTGTTTCT
CTTATACAGAAAGGAAGAAGGAAGTATGATGCCTTCCCCAGCCTGACAGA
CTGGAGATTCAATCTGGGATTTAAAAAGTGGCCAGAGAATAGATAAGTGA
AACCAGAGCAAGACAATGCTGCAACAGAGAGGGCAGGATTCACCCTGGTA
AGGGATCCACAAGGAGAAGAGCAGATATGAACCCCAGTAAGTGACAGTCA
AATGGGGGGTTCGGGATGGCCAAAAGGGGGATGGAAGCTCCAAACCAGCT
GCCAAATTCTCCTCACTTTACTGGAACCTCCACCATTGGTCCAATCACCT
TATGGTAAGCAAGAGTTGGAGGAACAAAAAGGAAACAATTTGTCTTAAGA
AAATATAACCCTTAGCAACAGCCACCTAGATTGGCTAACTGCTGAAATAA
GGTGGTTATACTTATAT

AATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTATCCCCATAGGGGCTGTAATCCTTCTT
CCTGTTCTTCCATAAGAGTCCCAAAGCTTCTTCCACTGTTTGGATGTGGG
TGTCTGCATCTGTCTGTGTTTCTGAGTCTTCTACTAGGTGAAACCTCCCA
GAGAACAGCCATGCTAAACTCCTGTTTGCAATCACAACAGAAAATCTGTA
ATAGATTCAGGGATTGGTGCTTGCCCATGGGATGAGATTCAAGTTGGGCT
GGTTAGTGGTTAGCCATTCCTTCAGTCTCTGCTCCATCTCTAATCCCTGA
ATTTCTTGGTGATAGGATGAGGGTTAGGTCAAAAGTTTTGTGGGTGGGAT
GGCCACAGGAGGCAAACAAAGACCCAGAAATAAACCTATGGACACTTGAT
TTTTGCTAAAGAAGCAAAAATCATCAATGGAAAAAAGAAAGCATCTTCAA
AAAATGGTGCTGGTATAACTGGATGTCTACATGTAGAAGAATGAAAATAG
ATCCATATTTATCTCCCTGCACAAAACTCAAGTCCAAGTAGATCAAAGAC
TTCAACATAAAACAAGATACACTAAGTCTCATAGAAGAGAAAGTGGGGAA
AACCCTTGAAAGCATTGGTACCAGAGATAACTTTAAACCATTTAGCAGAC
TCCACTACAATG

Query= MSMg01no108_e15.b1 MSMg01no108_e15.b1 CHROMAT_FILE:
MSMg01no108_e15.b1 PHD_FILE: MSMg01no108_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:06 2005
         (652 letters)



>mm_chr2_123315905_123316956
          Length = 1052

 Score = 1261 bits (652), Expect = 0.0
 Identities = 652/652 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcctttacgcttctgtctgtacctctcaacacatttattttcataccctgagcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagcctttacgcttctgtctgtacctctcaacacatttattttcataccctgagcatc 260

                                                                       
Query: 61  cgtgtaagacgtctgactacccatctgaatgtagaagggaggtgaggccctcagagaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgtaagacgtctgactacccatctgaatgtagaagggaggtgaggccctcagagaaag 320

                                                                       
Query: 121 gggagtggataggttcatagtgagaccatcattttgtcttccttataaaggtgacaactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagtggataggttcatagtgagaccatcattttgtcttccttataaaggtgacaactg 380

                                                                       
Query: 181 ggggaatcatcatttggggcactcagatctgtggtctaagatgaatattgtttctcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggaatcatcatttggggcactcagatctgtggtctaagatgaatattgtttctcttat 440

                                                                       
Query: 241 acagaaaggaagaaggaagtatgatgccttccccagcctgacagactggagattcaatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaaaggaagaaggaagtatgatgccttccccagcctgacagactggagattcaatct 500

                                                                       
Query: 301 gggatttaaaaagtggccagagaatagataagtgaaaccagagcaagacaatgctgcaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggatttaaaaagtggccagagaatagataagtgaaaccagagcaagacaatgctgcaac 560

                                                                       
Query: 361 agagagggcaggattcaccctggtaagggatccacaaggagaagagcagatatgaacccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagagggcaggattcaccctggtaagggatccacaaggagaagagcagatatgaacccc 620

                                                                       
Query: 421 agtaagtgacagtcaaatggggggttcgggatggccaaaagggggatggaagctccaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtaagtgacagtcaaatggggggttcgggatggccaaaagggggatggaagctccaaac 680

                                                                       
Query: 481 cagctgccaaattctcctcactttactggaacctccaccattggtccaatcaccttatgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagctgccaaattctcctcactttactggaacctccaccattggtccaatcaccttatgg 740

                                                                       
Query: 541 taagcaagagttggaggaacaaaaaggaaacaatttgtcttaagaaaatataacccttag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taagcaagagttggaggaacaaaaaggaaacaatttgtcttaagaaaatataacccttag 800

                                                               
Query: 601 caacagccacctagattggctaactgctgaaataaggtggttatacttatat 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caacagccacctagattggctaactgctgaaataaggtggttatacttatat 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)